Ignore:
Timestamp:
Apr 1, 2020, 5:03:13 PM (4 years ago)
Author:
Anne Philipp <anne.philipp@…>
Branches:
master, ctbto, dev
Children:
d78851d, e0005c9
Parents:
50f9ca6
Message:

updated online documentation FIX for tickets #265 and #262

File:
1 edited

Legend:

Unmodified
Added
Removed

  • For_developers/Sphinx/source/Installation/local.rst

    r30f7911 rb1674ed  
    6262| * `eccodes for python`_                        | * `emoslib`_    |
    6363| * `ecmwf-api-client`_ (everything except ERA5) |                 |
    64 | * `cdsapi`_ (just for ERA5)                    |                 |
     64| * `cdsapi`_ (just for ERA5 and member user)    |                 |
    6565+------------------------------------------------+-----------------+
    6666
    … …  
    116116     
    117117CDS API:
    118    Go to 'CDS API registration'_ and register there too. Log in at the `cdsapi`_ website and follow the instructions at section "Install the CDS API key" to save your credentials in a `.cdsapirc` file.
     118   Go to `CDS API registration`_ and register there too. Log in at the `cdsapi`_ website and follow the instructions at section "Install the CDS API key" to save your credentials in a `.cdsapirc` file.
    119119
    120120   
    … …  
    263263
    264264
    265 
    266 
    267265.. _ref-install-local:
    268266
    … …  
    270268==================
    271269
    272 First prepare the Fortran ``makefile`` for your environment and set it in the ``setup.sh`` script. (See section :ref:`ref-convert` for information on the Fortran program.)
    273 ``flex_extract`` comes with two ``makefiles`` prepared for the ``gfortran`` and
    274 the ``ifort`` compiler. The ``gfortran`` version assumes that ``eccodes`` and ``emoslib`` are installed as distribution packages.
    275 
    276  * makefile.local.gfortran
    277  * makefile.local.ifort
     270First prepare the Fortran ``makefile`` for your environment and set it in the ``setup.sh`` script. (See section :ref:`Fortran Makefile <ref-convert>` for more information.)
     271``flex_extract`` comes with two ``makefiles`` prepared for the ``gfortran`` compiler. One for the normal use ``makefile_fast`` and one for debugging ``makefile_debug`` which is usually only resonable for developers.
    278272 
    279 They can be found at ``flex_extract_vX.X/Source/Fortran``, where
    280 ``vX.X`` should be substituted with the current version number.
     273They assume that ``eccodes`` and ``emoslib`` are installed as distribution packages and can be found at ``flex_extract_vX.X/Source/Fortran``, where ``vX.X`` should be substituted with the current version number.
    281274
    282275.. caution::   
    … …  
    291284
    292285   cd flex_extract_vX.X/Source/Fortran
    293    nedit makefile.local.gfortran
     286   nedit makefile_fast
    294287 
    295288Edit the paths to the ``eccodes`` library on your local machine.
    … …  
    319312   
    320313   
    321 The Fortran program called ``CONVERT2`` will be compiled during the
     314The Fortran program called ``calc_etadot`` will be compiled during the
    322315installation process.Therefore the name of the ``makefile`` to be used needs to be given in  ``setup.sh``.
    323316
    … …  
    338331   #
    339332   TARGET='local'
    340    MAKEFILE='makefile.local.gfortran'
     333   MAKEFILE='makefile_fast'
    341334   ECUID=None
    342335   ECGID=None
    … …  
    360353.. code-block:: bash
    361354
    362    # Output of setup.sh   
    363    WARNING: installdir has not been specified
    364    flex_extract will be installed in here by compiling the Fortran source in /raid60/nas/tmc/Anne/Interpolation/flexextract/flex_extract_v7.1/source/fortran
    365    Install flex_extract_v7.1 software at local in directory /raid60/nas/tmc/Anne/Interpolation/flexextract/flex_extract_v7.1
    366 
    367    Using makefile: Makefile.local.gfortran
    368    gfortran   -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore  -ffixed-line-length-132 -fopenmp  -fconvert=big-endian  -c -g -O3 -fopenmp phgrreal.f
    369    gfortran   -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore  -ffixed-line-length-132 -fopenmp  -fconvert=big-endian  -c -g -O3 -fopenmp grphreal.f
    370    gfortran   -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore  -ffixed-line-length-132 -fopenmp  -fconvert=big-endian  -c -g -O3 -fopenmp ftrafo.f
    371    gfortran   -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore  -ffixed-line-length-132 -fopenmp  -fconvert=big-endian  -c -O3 -fopenmp -I. -I/usr/local/gcc-4.9.3/grib_api-1.14.3/include -O3 rwGRIB2.f90
    372    gfortran   -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore  -ffixed-line-length-132 -fopenmp  -fconvert=big-endian  -c -O3 -fopenmp -I. -I/usr/local/gcc-4.9.3/grib_api-1.14.3/include -O3 posnam.f
    373    gfortran   -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore  -ffixed-line-length-132 -fopenmp  -fconvert=big-endian  -c -O3 -fopenmp -I. -I/usr/local/gcc-4.9.3/grib_api-1.14.3/include -O3 preconvert.f90
    374    gfortran   -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore  -ffixed-line-length-132 -fopenmp  -fconvert=big-endian  -O3 -O3 -fopenmp -o ./CONVERT2 ftrafo.o phgrreal.o grphreal.o rwGRIB2.o posnam.o preconvert.o -L/usr/local/gcc-4.9.3/grib_api-1.14.3/lib -Bstatic  -lgrib_api_f77 -lgrib_api_f90 -lgrib_api -Bdynamic  -lm  -ljasper -lemosR64
    375 
    376    -rwxrwxr-x. 1 philipa8 tmc 282992 May 23 22:27 ./CONVERT2
    377 
    378 
    379 
    380 
    381 
     355    # Output of setup.sh   
     356        WARNING: installdir has not been specified
     357        flex_extract will be installed in here by compiling the Fortran source in <path-to-flex_extract>/flex_extract_v7.1/Source/Fortran
     358        Install flex_extract_v7.1 software at local in directory <path-to-flex_extract>/flex_extract_v7.1
     359
     360        Using makefile: makefile_fast
     361        gfortran   -O3 -march=native -Bstatic -leccodes_f90 -leccodes -Bdynamic -lm -ljasper -lemosR64 -I. -I/usr/local/include -fdefault-real-8 -fopenmp -fconvert=big-endian   -c     ./rwgrib2.f90
     362        gfortran   -O3 -march=native -Bstatic -leccodes_f90 -leccodes -Bdynamic -lm -ljasper -lemosR64 -I. -I/usr/local/include -fdefault-real-8 -fopenmp -fconvert=big-endian   -c     ./phgrreal.f90
     363        gfortran   -O3 -march=native -Bstatic -leccodes_f90 -leccodes -Bdynamic -lm -ljasper -lemosR64 -I. -I/usr/local/include -fdefault-real-8 -fopenmp -fconvert=big-endian   -c     ./grphreal.f90
     364        gfortran   -O3 -march=native -Bstatic -leccodes_f90 -leccodes -Bdynamic -lm -ljasper -lemosR64 -I. -I/usr/local/include -fdefault-real-8 -fopenmp -fconvert=big-endian   -c     ./ftrafo.f90
     365        gfortran   -O3 -march=native -Bstatic -leccodes_f90 -leccodes -Bdynamic -lm -ljasper -lemosR64 -I. -I/usr/local/include -fdefault-real-8 -fopenmp -fconvert=big-endian   -c     ./calc_etadot.f90
     366        gfortran   -O3 -march=native -Bstatic -leccodes_f90 -leccodes -Bdynamic -lm -ljasper -lemosR64 -I. -I/usr/local/include -fdefault-real-8 -fopenmp -fconvert=big-endian   -c     ./posnam.f90
     367        gfortran  rwgrib2.o calc_etadot.o ftrafo.o grphreal.o posnam.o phgrreal.o -o calc_etadot_fast.out  -O3 -march=native -Bstatic -leccodes_f90 -leccodes -Bdynamic -lm -ljasper -lemosR64 -fopenmp
     368        ln -sf calc_etadot_fast.out calc_etadot
     369
     370        lrwxrwxrwx. 1 <username> tmc 20 15. Mär 13:31 ./calc_etadot -> calc_etadot_fast.out
     371
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