Changeset b1674ed in flex_extract.git for Documentation/html/_modules/install.html


Ignore:
Timestamp:
Apr 1, 2020, 5:03:13 PM (4 years ago)
Author:
Anne Philipp <anne.philipp@…>
Branches:
master, ctbto, dev
Children:
d78851d, e0005c9
Parents:
50f9ca6
Message:

updated online documentation FIX for tickets #265 and #262

File:
1 edited

Legend:

Unmodified
Added
Removed

  • Documentation/html/_modules/install.html

    reca358d rb1674ed  
    2222   
    2323      <script type="text/javascript" id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>
    24         <script type="text/javascript" src="../_static/jquery.js"></script>
    25         <script type="text/javascript" src="../_static/underscore.js"></script>
    26         <script type="text/javascript" src="../_static/doctools.js"></script>
    27         <script type="text/javascript" src="../_static/language_data.js"></script>
    28         <script async="async" type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     24        <script src="../_static/jquery.js"></script>
     25        <script src="../_static/underscore.js"></script>
     26        <script src="../_static/doctools.js"></script>
     27        <script src="../_static/language_data.js"></script>
     28        <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
    2929   
    3030    <script type="text/javascript" src="../_static/js/theme.js"></script>
    … …  
    226226<span class="c1"># MODULES</span>
    227227<span class="c1"># ------------------------------------------------------------------------------</span>
    228 <span class="kn">from</span> <span class="nn">__future__</span> <span class="k">import</span> <span class="n">print_function</span>
     228<span class="kn">from</span> <span class="nn">__future__</span> <span class="kn">import</span> <span class="n">print_function</span>
    229229
    230230<span class="kn">import</span> <span class="nn">os</span>
    … …  
    232232<span class="kn">import</span> <span class="nn">subprocess</span>
    233233<span class="kn">import</span> <span class="nn">tarfile</span>
    234 <span class="kn">from</span> <span class="nn">argparse</span> <span class="k">import</span> <span class="n">ArgumentParser</span><span class="p">,</span> <span class="n">ArgumentDefaultsHelpFormatter</span>
     234<span class="kn">from</span> <span class="nn">argparse</span> <span class="kn">import</span> <span class="n">ArgumentParser</span><span class="p">,</span> <span class="n">ArgumentDefaultsHelpFormatter</span>
    235235
    236236<span class="c1"># software specific classes and modules from flex_extract</span>
    237237<span class="kn">import</span> <span class="nn">_config</span>
    238 <span class="kn">from</span> <span class="nn">Classes.ControlFile</span> <span class="k">import</span> <span class="n">ControlFile</span>
    239 <span class="kn">from</span> <span class="nn">Classes.UioFiles</span> <span class="k">import</span> <span class="n">UioFiles</span>
    240 <span class="kn">from</span> <span class="nn">Mods.tools</span> <span class="k">import</span> <span class="p">(</span><span class="n">make_dir</span><span class="p">,</span> <span class="n">put_file_to_ecserver</span><span class="p">,</span> <span class="n">submit_job_to_ecserver</span><span class="p">,</span>
     238<span class="kn">from</span> <span class="nn">Classes.ControlFile</span> <span class="kn">import</span> <span class="n">ControlFile</span>
     239<span class="kn">from</span> <span class="nn">Classes.UioFiles</span> <span class="kn">import</span> <span class="n">UioFiles</span>
     240<span class="kn">from</span> <span class="nn">Mods.tools</span> <span class="kn">import</span> <span class="p">(</span><span class="n">make_dir</span><span class="p">,</span> <span class="n">put_file_to_ecserver</span><span class="p">,</span> <span class="n">submit_job_to_ecserver</span><span class="p">,</span>
    241241                        <span class="n">silent_remove</span><span class="p">,</span> <span class="n">execute_subprocess</span><span class="p">,</span> <span class="n">none_or_str</span><span class="p">)</span>
    242242
    … …  
    447447
    448448    <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">install_target</span> <span class="ow">and</span> <span class="n">c</span><span class="o">.</span><span class="n">install_target</span> <span class="o">!=</span> <span class="s1">&#39;local&#39;</span><span class="p">:</span>
    449         <span class="k">if</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">ecgid</span> <span class="ow">or</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">ecuid</span> <span class="ow">or</span> \
    450            <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">gateway</span> <span class="ow">or</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">destination</span><span class="p">:</span>
    451             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Please enter your ECMWF user id and group id as well &#39;</span> <span class="o">+</span>
    452                   <span class="s1">&#39;as the </span><span class="se">\n</span><span class="s1">name of the local gateway and the ectrans &#39;</span> <span class="o">+</span>
    453                   <span class="s1">&#39;destination &#39;</span><span class="p">)</span>
    454             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;with command line options --ecuid --ecgid </span><span class="se">\</span>
    455 <span class="s1">                   --gateway --destination&#39;</span><span class="p">)</span>
     449        <span class="k">if</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">ecgid</span> <span class="ow">or</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">ecuid</span><span class="p">:</span>
     450            <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Please enter your ECMWF user id and group id &#39;</span>
     451                  <span class="s1">&#39; with command line options --ecuid --ecgid&#39;</span><span class="p">)</span>
    456452            <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Try &quot;&#39;</span> <span class="o">+</span> <span class="n">sys</span><span class="o">.</span><span class="n">argv</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">&#39;/&#39;</span><span class="p">)[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">+</span> \
    457453                  <span class="s1">&#39; -h&quot; to print usage information&#39;</span><span class="p">)</span>
    458             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Please consult ecaccess documentation or ECMWF user </span><span class="se">\</span>
    459 <span class="s1">                   support for further details&#39;</span><span class="p">)</span>
     454            <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Please consult ecaccess documentation or ECMWF user &#39;</span>
     455                  <span class="s1">&#39;support for further details.</span><span class="se">\n</span><span class="s1">&#39;</span><span class="p">)</span>
    460456            <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
    461 
     457        <span class="k">if</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">gateway</span> <span class="ow">or</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">destination</span><span class="p">:</span>
     458            <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;WARNING: Parameters GATEWAY and DESTINATION were &#39;</span>
     459                  <span class="s1">&#39;not properly set for working on ECMWF server. </span><span class="se">\n</span><span class="s1">&#39;</span>
     460                  <span class="s1">&#39;There will be no transfer of output files to the &#39;</span>
     461                  <span class="s1">&#39;local gateway server possible!&#39;</span><span class="p">)</span>
    462462        <span class="k">if</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">installdir</span><span class="p">:</span>
    463463            <span class="n">c</span><span class="o">.</span><span class="n">installdir</span> <span class="o">=</span> <span class="s1">&#39;$</span><span class="si">{HOME}</span><span class="s1">&#39;</span>
    … …  
    613613
    614614<span class="sd">    &#39;&#39;&#39;</span>
    615     <span class="kn">from</span> <span class="nn">genshi.template.text</span> <span class="k">import</span> <span class="n">NewTextTemplate</span>
    616     <span class="kn">from</span> <span class="nn">genshi.template</span> <span class="k">import</span>  <span class="n">TemplateLoader</span>
    617     <span class="kn">from</span> <span class="nn">genshi.template.eval</span> <span class="k">import</span> <span class="n">UndefinedError</span>
     615    <span class="kn">from</span> <span class="nn">genshi.template.text</span> <span class="kn">import</span> <span class="n">NewTextTemplate</span>
     616    <span class="kn">from</span> <span class="nn">genshi.template</span> <span class="kn">import</span>  <span class="n">TemplateLoader</span>
     617    <span class="kn">from</span> <span class="nn">genshi.template.eval</span> <span class="kn">import</span> <span class="n">UndefinedError</span>
    618618
    619619    <span class="k">try</span><span class="p">:</span>
    … …  
    676676
    677677<span class="sd">    &#39;&#39;&#39;</span>
    678     <span class="kn">from</span> <span class="nn">genshi.template.text</span> <span class="k">import</span> <span class="n">NewTextTemplate</span>
    679     <span class="kn">from</span> <span class="nn">genshi.template</span> <span class="k">import</span>  <span class="n">TemplateLoader</span>
    680     <span class="kn">from</span> <span class="nn">genshi.template.eval</span> <span class="k">import</span>  <span class="n">UndefinedError</span>
     678    <span class="kn">from</span> <span class="nn">genshi.template.text</span> <span class="kn">import</span> <span class="n">NewTextTemplate</span>
     679    <span class="kn">from</span> <span class="nn">genshi.template</span> <span class="kn">import</span>  <span class="n">TemplateLoader</span>
     680    <span class="kn">from</span> <span class="nn">genshi.template.eval</span> <span class="kn">import</span>  <span class="n">UndefinedError</span>
    681681
    682682    <span class="k">if</span> <span class="n">fp_root</span> <span class="o">==</span> <span class="s1">&#39;../&#39;</span><span class="p">:</span>
    … …  
    744744
    745745<span class="sd">    &#39;&#39;&#39;</span>
    746     <span class="kn">from</span> <span class="nn">genshi.template.text</span> <span class="k">import</span> <span class="n">NewTextTemplate</span>
    747     <span class="kn">from</span> <span class="nn">genshi.template</span> <span class="k">import</span>  <span class="n">TemplateLoader</span>
    748     <span class="kn">from</span> <span class="nn">genshi.template.eval</span> <span class="k">import</span>  <span class="n">UndefinedError</span>
     746    <span class="kn">from</span> <span class="nn">genshi.template.text</span> <span class="kn">import</span> <span class="n">NewTextTemplate</span>
     747    <span class="kn">from</span> <span class="nn">genshi.template</span> <span class="kn">import</span>  <span class="n">TemplateLoader</span>
     748    <span class="kn">from</span> <span class="nn">genshi.template.eval</span> <span class="kn">import</span>  <span class="n">UndefinedError</span>
    749749
    750750    <span class="n">fp_root_path_to_python</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">fp_root</span><span class="p">,</span>
    … …  
    879879  <div role="contentinfo">
    880880    <p>
    881         &copy; Copyright 2019, Anne Philipp and Leopold Haimberger
     881        &copy; Copyright 2020, Anne Philipp and Leopold Haimberger
    882882
    883883    </p>
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