Changeset 373b74e in flex_extract.git for Templates/jobscript.template
- Timestamp:
- Jul 28, 2022, 10:48:14 AM (22 months ago)
- Branches:
- dev
- Children:
- 01bd8aa
- Parents:
- b6ea29e
- File:
-
- 1 edited
Legend:
- Unmodified
- Added
- Removed
-
Templates/jobscript.template
- Property mode changed from 100644 to 120000
r98f09d2 r373b74e 1 #!/bin/ksh 2 3 # ON ECGB: 4 # start with ecaccess-job-submit -queueName ecgb NAME_OF_THIS_FILE on gateway server 5 # start with sbatch NAME_OF_THIS_FILE directly on machine 6 7 #SBATCH --workdir=/scratch/ms/$usergroup/$username 8 #SBATCH --qos=normal 9 #SBATCH --job-name=flex_ecmwf 10 #SBATCH --output=flex_ecmwf.%j.out 11 #SBATCH --error=flex_ecmwf.%j.out 12 #SBATCH --mail-type=FAIL 13 #SBATCH --time=12:00:00 14 15 ## CRAY specific batch requests 16 ##PBS -N flex_ecmwf 17 ##PBS -q np 18 ##PBS -S /usr/bin/ksh 19 ## -o /scratch/ms/$usergroup/$username/flex_ecmwf.$$$${PBS_JOBID}.out 20 ## job output is in .ecaccess_DO_NOT_REMOVE 21 ##PBS -j oe 22 ##PBS -V 23 ##PBS -l EC_threads_per_task=24 24 ##PBS -l EC_memory_per_task=32000MB 25 26 set -x 27 export VERSION=$version_number 28 case $$$${HOST} in 29 *ecg*) 30 module unload grib_api 31 module unload emos 32 module load python3 33 module load eccodes 34 module load emos/455-r64 35 export PATH=$$$${PATH}:$fp_root_path 36 ;; 37 *cca*) 38 module switch PrgEnv-cray PrgEnv-intel 39 module load python3 40 module load eccodes 41 module load emos/455-r64 42 export SCRATCH=$$$${TMPDIR} 43 export PATH=$$$${PATH}:$fp_root_path 44 ;; 45 esac 46 47 cd $$$${SCRATCH} 48 mkdir -p extract$$$$$$$$ 49 cd extract$$$$$$$$ 50 51 export CONTROL=CONTROL 52 53 cat >$$$${CONTROL}<<EOF 54 $$control_content 55 EOF 56 57 58 submit.py --controlfile=$$$${CONTROL} --inputdir=./work --outputdir=./work 1> prot 2>&1 59 60 if [ $? -eq 0 ] ; then 61 l=0 62 for muser in `grep -i MAILOPS $$$${CONTROL}`; do 63 if [ $$$${l} -gt 0 ] ; then 64 mail -s flex.$$$${HOST}.$$$$$$$$ $$$${muser} <prot 65 fi 66 l=$(($$$${l}+1)) 67 done 68 else 69 l=0 70 for muser in `grep -i MAILFAIL $$$${CONTROL}`; do 71 if [ $$$${l} -gt 0 ] ; then 72 mail -s "ERROR! flex.$$$${HOST}.$$$$$$$$" $$$${muser} <prot 73 fi 74 l=$(($$$${l}+1)) 75 done 76 fi 77 1 jobscript.template.reading
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