Changes between Version 5 and Version 6 of FpClimateNorESM


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Timestamp:
May 6, 2016, 9:47:21 AM (8 years ago)
Author:
pesei
Comment:

put in proper trac markup

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  • FpClimateNorESM

    v5 v6  
    1 FLEPXART-NorESM/CAM (V1) is based on FLEXPART V9. Compared to the standard FLEXPART V9 this NorESm/CAM version does not allow nesting and it is tailored to run using the grid resolution of NorESM in the CMIP5 configuration (1.89°×2.5°) and 26 vertical levels.  The code is very similar to the original FLEXPARTV9. It uses a PATHNAMES file, and a COMMAND file to input the simulations settings. In COMMAND there is an added flag to set the method to calculate the vertical velocity (GMD manuscript in preparation, see bottom of the page) and in PATHNAMES there is an additional path to a file defining the grid structure of the meteorological input data.
     1FLEPXART-NorESM/CAM (V1) is based on FLEXPART V9. The code is very similar to the original FLEXPARTV9.
    22
    3 The download and installation test procedure:
     3- Compared to the standard FLEXPART V9 this NorESm/CAM version does not allow nesting and it is tailored to run using the grid resolution of NorESM in the CMIP5 configuration (1.89°×2.5°) and 26 vertical levels.   
     4- In COMMAND there is an added flag to set the method to calculate the vertical velocity (see GMD manuscript in preparation, see bottom of the page) and
     5- in PATHNAMES there is an additional path to a file defining the grid structure of the meteorological input data.
    46
    5 1) Create a base directory e.g.
    6   mkdir ~/repos
     7The download and installation test procedure (you need git on your local system, available as standard package of all Linux distros (Git homepage: https://git-scm.com/downloads). ):
    78
    8 2) Get the code using Git, type the command:
    9  git clone !https://www.flexpart.eu/gitmob/flexpart -b flexpart-noresm
     91. Create a base directory e.g.[[BR]]
     10  `mkdir ~/repos`
    1011
    11  Make sure Git is installed in your system  https://git-scm.com/downloads. This will create a local “flexpart” directory containing the sub-directories “src” (with sources), “tests” and “options”
     122. Get the code using Git, type the command: [[BR]]
     13 `git clone https://www.flexpart.eu/gitmob/flexpart -b flexpart-noresm` This will create a local `flexpart` directory containing the sub-directories
     14 - `src` (with sources),
     15 - `tests` and
     16 - `options`.[[BR]]
    1217
    13 3) Get the meteorological data and two extra “.dat” files needed by FLEXPART  (~650 Mb)
    14  Download the file “flexpartnoresm.dat.tar”  from:
     183. Get the meteorological data and two extra `.dat` files needed by FLEXPART  (~650 Mb):
     19 Download the file `flexpartnoresm.dat.tar`  from
    1520 https://www.flexpart.eu/downloads/53
    1621
    17 4) Decompress the data using the command:
    18  tar -xf flexpartnoresm.dat.tar
     224. Decompress the data using the command:[[BR]]
     23 `tar -xf flexpartnoresm.dat.tar`[[BR]]
     24 the archive contains the driving meteorological data for tests (in sub-directory `meteogrid`) and two essential input  `.dat`  files that FLEXPART needs in the `options` directory
    1925
    20  the archive contains the driving meteorological data for tests (in sub-directory “meteogrid”) and two essential input  “.dat”  files that FLEXPART needs in the “options” directory
    21 
    22 5) be sure to move the two input “.dat files”  mentioned in (4) to the options directory e.g. use command:
    23   mv *.dat options
     265. Be sure to move the two input `.dat` files  mentioned in 4. to the options directory e.g. use command: `mv *.dat options`
     27 '
     286.  Once the structure is in place one has to create the executable.
     29 a. make sure the NetCDF libraries are available (Standard package for Linux, see also http://www.unidata.ucar.edu/software/netcdf/)
     30 b. modify the makefile where needed to link to your local NetCDF library
     31 c. make the executable:  `make -f makefile_noresm_gfortran`
    2432 
    25 6)  Once the structure is in place one has to create the executable.
    26 
    27  a) make sure the NetCDF libraries are available (http://www.unidata.ucar.edu/software/netcdf/)
    28 
    29  b) modify the makefile where needed to link to your local NetCDF library
    30 
    31  c) make the executable:  make -f makefile_noresm_gfortran
    32  
    33 7) Finally test that the installation works
    34 
    35  a) go to the “tests” directory
    36 
    37  b1) execute the file  ./create_tests
    38  It will create 3 basic test cases in the directory ~/repos/flexpart/tests_tmp
    39 
    40  b2) or execute the file  /create_and_run
     337. Finally test that the installation works
     34 a. go to the `tests` directory
     35 b. execute the file  `./create_tests`[[BR]]
     36 It will create 3 basic test cases in the directory `~/repos/flexpart/tests_tmp`[[br]]
     37 or[[br]] execute the file  `./create_and_run`[[br]]
    4138 It  will create the tests and run automatically
    4239
    4340The Reference for the FLEXPART-NorESM/CAM model version is:
    44 Cassiani M., Stohl A., Olivié D., Seland Ø., Bethke I., Pisso I., Iversen T. (2016): The Lagrangian particle model FLEXPART-NorESM/CAM: model description, validation and an example application. To be submitted soon to Geoscientific Model Development Discussion.
     41
     42Cassiani M., Stohl A., Olivié D., Seland Ø., Bethke I., Pisso I., Iversen T. (2016): '''The Lagrangian particle model FLEXPART-NorESM/CAM: model description, validation and an example application'''. To be submitted soon to ''[http://www.geosci-model-dev-discuss.net/ Geoscientific Model Development Discussion]''.