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Ticket Resolution Summary Owner Reporter
#254 fixed Segmentation Fault at first step in version 10.4 pesei mradenz
Description

Hi all,

I tried to redo some simulations that succeeded with Flexpart 9.0.2 and 9.0.3. Using version 10.4, after compiling with eccodes and jasper and adapting the input files to the namelist, i get the following error:

Welcome to FLEXPART Version 10.4 (2019-07-23)
 FLEXPART is free software released under the GNU General Public License.
 FLEXPART WARNING: TIME DIFFERENCE BETWEEN TWO
 WIND FIELDS IS BIG. THIS MAY CAUSE A DEGRADATION
 OF SIMULATION QUALITY.
 NCEP metdata detected


Vertical levels in NCEP data:      31     31

Mother domain:
  Longitude range:    -179.00     181.00   Grid distance:       1.00
  Latitude range :     -90.00      90.00   Grid distance:       1.00

 Releasepoints :           24
 SPECIES file not in NAMELIST format, attempting to read as fixed format
 Average settling velocity:            1              NaN
   Below-cloud scavenging: OFF
   In-cloud scavenging: OFF
 Particles allocated (maxpart)  :       150000
 Particles released (numpartmax):       120000
 Total mass released: 2.4000000E+01
 Allocating fields for global output (x,y):          360          90
 Allocating fields for nested output (x,y):            0           0
 Concentrations are calculated using kernel
 Simulated     0.0 hours (            0 s),             0 particles
 Global NCEP fields: using cloud water
 Global NCEP fields: using cloud water

Program received signal SIGSEGV: Segmentation fault - invalid memory reference.

Backtrace for this error:
#0  0x7fc3510eb2da in ???
#1  0x7fc3510ea503 in ???
#2  0x7fc35171df1f in ???
#3  0x5571b5a3c530 in conccalc
        at /workingdir/flexpart_v10.4_e4925fb/src/conccalc.f90:128
#4  0x5571b5a49677 in timemanager_
        at /workingdir/flexpart_v10.4_e4925fb/src/timemanager.f90:377
#5  0x5571b5a23e80 in flexpart
        at /workingdir/flexpart_v10.4_e4925fb/src/FLEXPART.f90:472
#6  0x5571b5a24250 in main
        at /workingdir/flexpart_v10.4_e4925fb/src/FLEXPART.f90:50
Segmentation fault (core dumped)

As input data I used the NCEP FNL 1deg in grib2 format (the same ones with which the older versions succeeded). Did I overlook anything? Thanks for your help. Regards, Martin

#253 wontfix Flex_Extract MARS request failed anphi nanditha
Description

Hi,

Im getting the following error, when I request data using submit.py.

2019-10-28 10:56:25 ECMWF API python library 1.5.4
2019-10-28 10:56:25 ECMWF API at https://api.ecmwf.int/v1
2019-10-28 10:56:27 Welcome nanditha js
Error:  <class 'ecmwfapi.api.APIException'>
MARS Request failed
Traceback (most recent call last):
  File "./submit.py", line 114, in <module>
    main()
  File "./submit.py", line 59, in main
    getMARSdata(args,c)
  File "/home/nanditha/lib/src/flexpart_9.0.3/flex_extract_v7.0.3/python/getMARSdata.py", line 116, in getMARSdata
    flexpart.retrieve(server, c.public, dates, times, c.inputdir)
  File "/home/nanditha/lib/src/flexpart_9.0.3/flex_extract_v7.0.3/python/FlexpartTools.py", line 979, in retrieve
    MR.dataRetrieve()
  File "/home/nanditha/lib/src/flexpart_9.0.3/flex_extract_v7.0.3/python/FlexpartTools.py", line 680, in dataRetrieve
    if not int(self.public) and os.stat(target).st_size==0:
OSError: [Errno 2] No such file or directory: '/home/nanditha/lib/src/flexpart_9.0.3/flex_extract_v7.0.3/python/../work/FCOG_acc_SL.20171104.3218.18276.grb'

I have requested data using the command ./submit.py --start_date 20171105 --controlfile CONTROL_EA5 I,m attaching the control file used for retrieval request

It would be highly appreciated if you could help me in this regard Thanks in advance

#251 fixed Installation issue with Flex_extract_v7.0.4 anphi nanditha
Description

I'm trying to install FLEX_EXTRACT 7.0.4 locally using the command ./install.py --target=local --makefile=Makefile.local.gfortan but it is not reading the target.

I'm getting an error message

cal --makefile=Makefile.local.gfortan

File "./install.py", line 60

print 'Please specify installation target (local|ecgate|cca)'

SyntaxError?: invalid syntax

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