1 | #!/bin/ksh |
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2 | |
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3 | # On demand script for retrieving input for FLEXPART trajectory model |
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4 | # Version 6.0, September 2013 |
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5 | # Maintainer Leopold Haimberger leopold.haimberger@univie.ac.at |
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6 | # |
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7 | #@ shell = /usr/bin/ksh |
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8 | |
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9 | # NOTE: If calculation on Gaussian grid are required below, it is |
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10 | # recommended to send the job to the ECMWF HPC facility |
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11 | # NOTE: On hpce the class should be ns or np |
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12 | # NOTE: On ecgb it should be normal |
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13 | |
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14 | |
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15 | #ON HPC (with loadleveler) |
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16 | # start with ecaccess-job-submit -queueName c1a NAME_OF_THIS_FILE on gateway server |
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17 | # start with llsubmit NAME_OF_THIS_FILE directly on machine |
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18 | |
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19 | #@ shell = /usr/bin/ksh |
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20 | #@ class = ns |
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21 | #@ resources = ConsumableCpus(1) ConsumableMemory(32000MB) |
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22 | #@ job_name = flex_ecmwf |
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23 | #@ output = /scratch/ms/spatlh00/lh0/$(job_name).$(host).$(jobid).out |
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24 | #@ error = /scratch/ms/spatlh00/lh0/$(job_name).$(host).$(jobid).out |
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25 | #@ environment = COPY_ALL |
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26 | #@ queue |
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27 | |
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28 | |
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29 | # ON ECGB: |
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30 | # start with ecaccess-job-submit -queueName ecgb NAME_OF_THIS_FILE on gateway server |
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31 | # start with sbatch NAME_OF_THIS_FILE directly on machine |
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32 | |
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33 | #SBATCH --workdir=/scratch/ms/spatlh00/lh0 |
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34 | #SBATCH --qos=normal |
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35 | #SBATCH --job-name=flex_ecmwf |
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36 | #SBATCH --output=flex_ecmwf.%j.out |
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37 | #SBATCH --error=flex_ecmwf.%j.out |
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38 | #SBATCH --mail-type=FAIL |
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39 | #SBATCH --time=12:00:00 |
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40 | |
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41 | set -x |
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42 | |
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43 | JOBNAME=flex_ecmwf_${HOST} |
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44 | |
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45 | env |
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46 | ulimit -a |
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47 | export OMP_NUM_THREADS=1 |
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48 | export MARS_MULTITARGET_STRICT_FORMAT=1 |
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49 | |
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50 | #export SCRATCH=$TEMP |
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51 | export SCRATCHDIR=${SCRATCH}/${JOBNAME}_$$ |
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52 | [ -z "$WSHOME" ] && WSHOME=$HOME |
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53 | |
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54 | |
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55 | mkdir $SCRATCHDIR |
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56 | cd $SCRATCHDIR |
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57 | |
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58 | LOG_FILE=$SCRATCHDIR/${JOBNAME}_$$ |
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59 | exec 1>${LOG_FILE} |
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60 | |
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61 | CONTROLFILE=./CONTROL_ERA |
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62 | |
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63 | ################################### |
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64 | #BEGIN: modification of config file |
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65 | ################################### |
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66 | |
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67 | cat <<EOF >CONTROL_ERA |
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68 | DAY1 20131107 |
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69 | DAY2 20131108 |
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70 | DTIME 3 |
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71 | M_TYPE CV CV CV CV CV CV CV CV CV CV CV CV CV CV CV CV CV CV CV CV CV CV CV CV |
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72 | M_TIME 00 00 00 00 00 00 00 00 00 00 00 00 12 12 12 12 12 12 12 12 12 12 12 12 |
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73 | M_STEP 00 01 02 03 04 05 06 07 08 09 10 11 00 01 02 03 04 05 06 07 08 09 10 11 |
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74 | M_CLASS OD |
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75 | M_STREAM ENFO |
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76 | M_NUMBER 1 |
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77 | M_EXPVER 1 |
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78 | M_GRID 1000 |
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79 | M_LEFT -179000 |
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80 | M_LOWER -90000 |
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81 | M_UPPER 90000 |
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82 | M_RIGHT 180000 |
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83 | M_LEVEL 62 |
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84 | M_RESOL 159 |
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85 | M_GAUSS 1 |
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86 | M_ACCURACY 24 |
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87 | M_OMEGA 0 |
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88 | M_OMEGADIFF 0 |
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89 | M_ETA 0 |
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90 | M_ETADIFF 0 |
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91 | M_DPDETA 1 |
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92 | M_SMOOTH 0 |
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93 | M_FORMAT GRIB1 |
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94 | M_ADDPAR /27/28/173/186/187/188/235/139/39 |
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95 | PREFIX EG |
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96 | GATEWAY srvx7.img.univie.ac.at |
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97 | DESTINATION leo@genericSftp |
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98 | ECSTORAGE 1 |
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99 | ECTRANS 0 |
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100 | ECFSDIR ectmp:/${USER}/econdemand/ |
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101 | MAILOPS ${USER} |
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102 | MAILFAIL ${USER} |
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103 | EXEDIR . |
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104 | SOURCECODE ${WSHOME}/flex_extract_ecgate_V6.0 |
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105 | EOF |
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106 | # no changes below |
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107 | |
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108 | NRW=0 |
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109 | |
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110 | #ksh scripts for date manipulation |
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111 | juldate2() |
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112 | { |
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113 | let jc=$1 |
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114 | if (( ${#jc} < 8 )) |
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115 | then |
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116 | print "illegal date!" |
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117 | exit 1 |
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118 | fi |
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119 | let y=`echo $jc | cut -c1-4` |
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120 | let m1=`echo $jc | cut -c5` |
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121 | let m2=`echo $jc | cut -c6` |
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122 | m=$m1$m2 |
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123 | let d1=`echo $jc | cut -c7` |
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124 | let d2=`echo $jc | cut -c8` |
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125 | d=$d1$d2 |
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126 | let jd=367*y-7*(y+(m+9)/12)/4+275*m/9+d+1721014 |
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127 | let jd=jd+15-3*((y+(m-9)/7)/100+1)/4 |
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128 | print $jd |
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129 | } |
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130 | |
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131 | civildate2() |
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132 | { |
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133 | let jd=$1 |
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134 | if (( jd < 1721060 )) |
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135 | then |
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136 | print "Julian date not in AD." |
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137 | exit 1 |
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138 | fi |
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139 | let k=jd+68569 |
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140 | let n=4*k/146097 |
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141 | let k=k-\(146097*n+3\)/4 |
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142 | let y=4000*(k+1)/1461001 |
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143 | let k=k-1461*y/4+31 |
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144 | let m=80*k/2447 |
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145 | let d=k-\(2447*m\)/80 |
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146 | let k=m/11 |
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147 | let m=m+2-12*k |
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148 | let y=100*(n-49)+y+k |
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149 | [ $m -le 9 ] && m=0$m |
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150 | [ $d -le 9 ] && d=0$d |
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151 | print $y$m$d |
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152 | } |
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153 | |
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154 | date2m1() |
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155 | { |
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156 | let ymd=$1 |
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157 | let j1=`juldate2 $ymd` |
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158 | let j0=j1-1 |
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159 | civildate2 $j0 |
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160 | } |
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161 | |
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162 | date2p1() |
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163 | { |
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164 | let ymd=$1 |
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165 | let j1=`juldate2 $ymd` |
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166 | let j0=j1+1 |
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167 | civildate2 $j0 |
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168 | } |
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169 | |
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170 | |
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171 | marsinst() |
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172 | { |
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173 | MTYPE="${1}" |
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174 | MDAY="${2}" |
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175 | MTIME="${3}" |
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176 | MSTEP="${4}" |
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177 | MPAR="${5}" |
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178 | MFN=$6 |
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179 | MLTY=$7 |
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180 | MGRID="${8}" |
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181 | MLEV="${9}" |
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182 | |
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183 | RED=0 |
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184 | #if [[ ${MTYPE} != 'AN' ]] ; then |
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185 | MPAR2=`echo ${MPAR} | sed s,160/,,` |
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186 | MPAR2=`echo ${MPAR2} | sed s,27/,,` |
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187 | MPAR2=`echo ${MPAR2} | sed s,28/,,` |
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188 | MPAR2=`echo ${MPAR2} | sed s,173/,,` |
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189 | if [[ ${MPAR2} != ${MPAR} ]] ; then |
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190 | MPAR=${MPAR2} |
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191 | RED=1 |
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192 | fi |
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193 | #fi |
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194 | |
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195 | MAREA=${M_AREA} |
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196 | if [[ ${10} == 'GAUSSIAN=REDUCED,' ]] ; then |
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197 | MAREA=G |
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198 | fi |
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199 | |
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200 | if [[ -f ${MFN} ]] ; then |
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201 | rm ${MFN} |
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202 | fi |
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203 | |
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204 | cat <<EOF >> marsjob |
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205 | RETRIEVE, |
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206 | TYPE=${MTYPE}, |
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207 | CLASS=${M_CLASS},NUMBER=${M_NUMBER}, |
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208 | EXPVER=${M_EXPVER},STREAM=${M_STREAM}, |
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209 | PARAM=${MPAR}, |
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210 | RESOL=${M_RESOL}, |
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211 | AREA=${MAREA}, |
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212 | GRID=${MGRID}, |
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213 | LEVTYPE=${MLTY}, |
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214 | LEVELIST=${MLEV}, |
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215 | ACCURACY=${M_ACCURACY}, |
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216 | DATE=${MDAY}, |
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217 | TIME=${MTIME}, |
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218 | STEP=${MSTEP},${10} |
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219 | TARGET="${MFN}" |
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220 | EOF |
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221 | |
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222 | if [[ ! -f 'OROLSM' && $RED -eq 1 ]] ; then |
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223 | |
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224 | cat <<EOF >> marsjob |
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225 | RETRIEVE,TYPE=AN,TIME=0,STEP=0,CLASS=OD, |
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226 | PARAM=160/27/28/173, |
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227 | TARGET="OROLSM" |
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228 | EOF |
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229 | fi |
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230 | |
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231 | } |
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232 | |
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233 | marsflux() |
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234 | { |
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235 | MTYPE="${1}" |
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236 | MSTEP="${2}" |
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237 | |
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238 | cat <<EOF >>mars_flux |
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239 | RETRIEVE, |
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240 | TYPE=${MTYPE}, |
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241 | CLASS=${M_CLASS},NUMBER=${M_NUMBER}, |
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242 | EXPVER=${M_EXPVER},STREAM=${M_STREAM}, |
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243 | PARAM=LSP/CP/SSHF/EWSS/NSSS/SSR, |
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244 | AREA=${M_AREA}, |
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245 | GRID=${D_GRID}, |
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246 | LEVTYPE=SFC, |
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247 | LEVELIST=OFF, |
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248 | ACCURACY=${M_ACCURACY}, REPRES=GG, |
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249 | DATE=${DAY1M1}/TO/${DAY2P1}, |
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250 | TIME=00/12, |
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251 | AC=N, |
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252 | STEP=${MSTEP}, |
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253 | TARGET="surf_${MSTEP}_ub" |
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254 | EOF |
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255 | } |
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256 | |
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257 | |
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258 | myerror() |
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259 | { |
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260 | |
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261 | echo $1 |
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262 | echo $2 |
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263 | echo $3 |
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264 | echo ABORT! |
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265 | |
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266 | for MUSER in $MAILFAIL |
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267 | do |
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268 | mailx -s ERROR:${JOBNAME} ${MUSER} <${LOG_FILE} |
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269 | done |
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270 | } |
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271 | |
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272 | # |
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273 | # MAIN SCRIPT CONTINUES HERE |
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274 | # |
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275 | #read CONTROL file, process specifications |
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276 | while read NAME PARA |
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277 | do |
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278 | |
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279 | if [[ $NAME == 'M_TYPE' || $NAME == 'M_TIME' || $NAME == 'M_STEP' ]] ; then |
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280 | eval "set -A $NAME $PARA" |
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281 | else |
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282 | eval "export $NAME='$PARA'" |
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283 | fi |
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284 | echo `echo $NAME`=$PARA |
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285 | |
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286 | done <${CONTROLFILE} |
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287 | |
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288 | |
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289 | if [ -z "$DAY1" -o -z "$DAY2" ]; then |
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290 | myerror 'DAY specification missing !' |
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291 | exit 1 |
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292 | fi |
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293 | |
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294 | #defaults |
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295 | [ -z "$M_EXPVER" ] && M_EXPVER=1 |
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296 | [ -z "$M_CLASS" ] && M_CLASS=OD |
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297 | [ -z "$M_STREAM" ] && M_STREAM=OPER |
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298 | [ -z "$M_NUMBER" ] && M_NUMBER=OFF |
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299 | [ -z "$M_TYPE" ] && set -A M_TYPE AN FC FC FC FC FC AN FC FC FC FC FC AN FC FC FC FC FC AN FC FC FC FC FC |
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300 | [ -z "$M_TIME" ] && set -A M_TIME 00 00 00 00 00 00 06 00 00 00 00 00 12 12 12 12 12 12 18 12 12 12 12 12 |
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301 | [ -z "$M_STEP" ] && set -A M_STEP 00 01 02 03 04 05 00 07 08 09 10 11 00 01 02 03 04 05 00 07 08 09 10 11 |
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302 | [ -z "$DTIME" ] && DTIME=6 |
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303 | [ -z "$M_GRID" ] && M_GRID=1000 |
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304 | [ -z "$M_LOWER" ] && M_LOWER=-90000 |
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305 | [ -z "$M_LEFT" ] && M_LEFT=-179000 |
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306 | [ -z "$M_UPPER" ] && M_UPPER=90000 |
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307 | [ -z "$M_RIGHT" ] && M_RIGHT=180000 |
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308 | [ -z "$M_LEVEL" ] && M_LEVEL=91 |
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309 | [ -z "$M_LEVELIST" ] && M_LEVELIST=1/TO/$M_LEVEL |
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310 | [ -z "$M_ADDPAR" ] && M_ADDPAR='' |
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311 | [ -z "$M_RESOL" ] && M_RESOL=799 |
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312 | [ -z "$M_GAUSS" ] && M_GAUSS=0 |
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313 | [ -z "$M_SMOOTH" ] && M_SMOOTH=0 |
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314 | [ -z "$M_OMEGA" ] && M_OMEGA=0 |
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315 | [ -z "$M_OMEGADIFF" ] && M_OMEGADIFF=0 |
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316 | [ -z "$M_ETA" ] && M_ETA=0 |
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317 | [ -z "$M_ETADIFF" ] && M_ETADIFF=0 |
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318 | [ -z "$M_ETAPAR" ] && M_ETAPAR=77 |
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319 | [ -z "$M_DPDETA" ] && M_DPDETA=1 |
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320 | [ -z "$M_ACCURACY" ] && M_ACCURACY=24 |
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321 | [ -z "$EXEDIR" ] && EXEDIR=. |
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322 | [ -z "$SOURCECODE" ] && SOURCECODE=ecgate:flex_extract_ecgate |
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323 | [ -z "$GATEWAY" ] && GATEWAY='' |
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324 | [ -z "$DESTINATION" ] && DESTINATION='' |
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325 | [ -z "$PREFIX" ] && PREFIX=EN |
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326 | [ -z "$COMPRESSION" ] && COMPRESSION=grid_simple |
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327 | [ -z "$ECTRANS" ] && ECTRANS=0 |
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328 | [ -z "$ECSTORAGE" ] && ECSTORAGE=1 |
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329 | [ -z "$ECFSDIR" ] && ECFSDIR=ectmp: |
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330 | [ -z "$MAILOPS" ] && MAILOPS=${USER} |
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331 | [ -z "$MAILFAIL" ] && MAILFAIL=${USER} |
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332 | |
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333 | |
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334 | #additional dates for flux retrievals (polynomial interpolation) |
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335 | DAY1M1=`date2m1 ${DAY1}` |
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336 | DAY2P1=`date2p1 ${DAY2}` |
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337 | |
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338 | #julian dates for time loops |
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339 | JULDAY1=`juldate2 ${DAY1}` |
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340 | JULDAY2=`juldate2 ${DAY2}` |
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341 | |
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342 | echo JULDATES $JULDAY1 $JULDAY2 |
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343 | |
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344 | #check consistency |
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345 | if [ ${DAY1} -gt ${DAY2} ]; then |
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346 | `myerror "ERROR: DAY1 > DAY2: ${DAY1}, ${DAY2}"` |
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347 | exit 1 |
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348 | fi |
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349 | |
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350 | |
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351 | # determine number of gridpoints and whether grid is cyclic |
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352 | ZYK=`expr \( $M_RIGHT + 360000 \) % 360000 - \( $M_LEFT + 360000 \) % 360000 + $M_GRID` |
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353 | |
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354 | if [ $M_RIGHT -le $M_LEFT ] ; then |
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355 | if [ $M_RIGHT -le 0 ] ; then |
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356 | M_RIGHT=$(($M_RIGHT+360000)) |
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357 | else |
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358 | M_LEFT=$(($M_LEFT-360000)) |
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359 | fi |
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360 | fi |
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361 | |
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362 | if [[ $ZYK -ne 0 ]] ; then |
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363 | MAXB=$((($M_UPPER-($M_LOWER))/$M_GRID+1)) |
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364 | MAXL=$((($M_RIGHT-($M_LEFT))/$M_GRID+1)) |
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365 | |
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366 | if [[ $((($M_RIGHT-($M_LEFT))%$M_GRID)) -ne 0 || $((($M_UPPER-($M_LOWER))%$M_GRID)) -ne 0 ]] ; then |
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367 | myerror "ERROR: LAT/LON RANGE MUST BE INTEGER MULTIPLES OF GRID SIZE" "URLO: $M_UPPER $M_RIGHT $M_LOWER $M_LEFT GRID: $M_GRID" "GRID ASSUMED NON-CYCLIC" |
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368 | exit 1 |
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369 | fi |
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370 | else |
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371 | MAXL=$((($M_RIGHT-($M_LEFT))/$M_GRID+1)) |
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372 | MAXB=$((($M_UPPER-($M_LOWER))/$M_GRID+1)) |
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373 | if [[ $((($M_RIGHT-($M_LEFT))%$M_GRID)) -ne 0 || $((($M_UPPER-($M_LOWER))%$M_GRID)) -ne 0 ]] ; then |
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374 | myerror "ERROR: LAT/LON RANGE MUST BE INTEGER MULTIPLES OF GRID SIZE" "URLO: $M_UPPER $M_RIGHT $M_LOWER $M_LEFT GRID: $M_GRID" "GRID ASSUMED CYCLIC" |
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375 | exit 1 |
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376 | fi |
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377 | fi |
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378 | |
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379 | if [ $((180000/$M_GRID-$M_RESOL)) -lt 0 ] ; then |
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380 | |
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381 | if [ ${M_SMOOTH} -eq 0 ] ; then |
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382 | myerror "ERROR: OUTPUT GRID SPACING OF $((${M_GRID}/1000)).$((${M_GRID}%1000)) DEGREE IS TOO COARSE FOR GIVEN SPECTRAL RESOLUTION ${M_RESOL} " "USE M_SMOOTH FOR SMOOTHING OR FINER OUTPUT GRID" |
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383 | # exit 1 |
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384 | else |
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385 | if [ $((180000/$M_GRID-$M_SMOOTH)) -lt 0 ] ; then |
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386 | myerror "ERROR: OUTPUT GRID SPACING OF $((${M_GRID}/1000)).$((${M_GRID}%1000)) DEGREE IS TOO COARSE FOR GIVEN SMOOTHED SPECTRAL RESOLUTION ${M_SMOOTH} " |
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387 | fi |
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388 | fi |
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389 | |
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390 | fi |
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391 | |
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392 | |
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393 | # convert lat/lon to MARS format (degrees) |
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394 | if [[ $M_LEFT -lt 0 ]] ; then |
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395 | LLLO=$(($M_LEFT / 1000)).$((($M_LEFT)*(-1) % 1000)) |
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396 | else |
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397 | LLLO=$(($M_LEFT / 1000)).$(($M_LEFT % 1000)) |
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398 | fi |
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399 | if [[ $M_LOWER -lt 0 ]] ; then |
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400 | LLLA=$(($M_LOWER / 1000)).$(($M_LOWER*(-1) % 1000)) |
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401 | else |
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402 | LLLA=$(($M_LOWER / 1000)).$((($M_LOWER) % 1000)) |
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403 | fi |
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404 | if [[ $M_RIGHT -lt 0 ]] ; then |
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405 | URLO=$(($M_RIGHT / 1000)).$((($M_RIGHT)*(-1) % 1000)) |
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406 | else |
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407 | URLO=$(($M_RIGHT / 1000)).$(($M_RIGHT % 1000)) |
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408 | fi |
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409 | if [[ $M_UPPER -lt 0 ]] ; then |
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410 | URLA=$(($M_UPPER / 1000)).$((($M_UPPER)*(-1) % 1000)) |
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411 | else |
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412 | URLA=$(($M_UPPER / 1000)).$(($M_UPPER % 1000)) |
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413 | fi |
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414 | |
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415 | M_AREA=${URLA}/${LLLO}/${LLLA}/${URLO} |
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416 | |
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417 | if [ $M_GAUSS -eq 1 ] ; then |
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418 | # Gaussian grid detected |
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419 | D_GRID=$(($M_GRID / 1000)).$(($M_GRID % 1000)) |
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420 | G_GRID=OFF |
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421 | QG_GRID=OFF |
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422 | if [ $M_RESOL -le 799 ] ; then |
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423 | QG_GRID=$((($M_RESOL+1)/2)) |
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424 | fi |
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425 | D_GRID=${D_GRID}/${D_GRID} |
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426 | |
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427 | else |
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428 | D_GRID=$(($M_GRID / 1000)).$(($M_GRID % 1000)) |
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429 | G_GRID=$(($M_GRID / 1000)).$(($M_GRID % 1000)) |
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430 | G_GRID=${G_GRID}/${G_GRID} |
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431 | D_GRID=${D_GRID}/${D_GRID} |
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432 | fi |
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433 | |
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434 | G_LEVELIST=1/to/${M_LEVEL} |
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435 | |
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436 | |
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437 | #namelist |
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438 | cat <<EOF >fort.4 |
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439 | &NAMGEN |
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440 | MAXL=${MAXL}, MAXB=${MAXB}, |
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441 | MLEVEL=${M_LEVEL}, MLEVELIST="${M_LEVELIST}", |
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442 | MNAUF=${M_RESOL},METAPAR=${M_ETAPAR}, |
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443 | RLO0=${LLLO}, RLO1=${URLO}, RLA0=${LLLA}, RLA1=${URLA}, |
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444 | MOMEGA=${M_OMEGA},MOMEGADIFF=${M_OMEGADIFF},MGAUSS=${M_GAUSS}, |
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445 | MSMOOTH=${M_SMOOTH},META=${M_ETA},METADIFF=${M_ETADIFF}, |
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446 | MDPDETA=${M_DPDETA} |
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447 | / |
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448 | &NAMFX2 |
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449 | NX=${MAXL}, NY=${MAXB}, |
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450 | MAXTIME=400,JPOLY=4, |
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451 | JHRF=${DTIME}, |
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452 | RLO0=${LLLO}, RLA0=${LLLA}, DX=${D_GRID}, DY=${D_GRID} |
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453 | / |
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454 | EOF |
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455 | |
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456 | |
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457 | if [[ $OS_VERSION == aix ]] ; then |
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458 | scp ecgb:${SOURCECODE}/source.tar . |
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459 | tar -xvf source.tar |
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460 | make -f Makefile.IBM FLXACC2 CONVERT2 CHECK |
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461 | else |
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462 | cp ${SOURCECODE}/source.tar . |
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463 | tar -xvf source.tar |
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464 | make -f Makefile.ecgb FLXACC2 CONVERT2 CHECK |
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465 | fi |
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466 | |
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467 | if [ $? -ne 0 ]; then |
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468 | |
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469 | ls |
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470 | myerror 'ERROR: FLXACC2 and CONVERT2 could not be compiled:' 'ABORT!' |
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471 | exit 1 |
---|
472 | else |
---|
473 | echo 'compile worked' |
---|
474 | fi |
---|
475 | |
---|
476 | |
---|
477 | # |
---|
478 | #MARS requests (field) |
---|
479 | # |
---|
480 | imax=6 |
---|
481 | set -A PARLIST U/V T Q LNSP SD/MSL/TCC/10U/10V/2T/2D 129/172/160${M_ADDPAR} |
---|
482 | set -A PARNAME 131/132 130 133 152 SURF OROLSM |
---|
483 | set -A REPR SH SH GG SH GG GG |
---|
484 | set -A UNIT 10 11 17 12 14 20 |
---|
485 | set -A LTY ML ML ML ML SFC SFC |
---|
486 | set -A GRID ${G_GRID} ${D_GRID} ${D_GRID} OFF ${D_GRID} ${D_GRID} |
---|
487 | set -A LEVELIST ${M_LEVELIST} ${M_LEVELIST} ${M_LEVELIST} 1 1 1 |
---|
488 | |
---|
489 | set -A FIELD 00 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 00 |
---|
490 | |
---|
491 | |
---|
492 | if [[ $M_OMEGA -eq 1 || $M_OMEGADIFF -eq 1 ]] ; then |
---|
493 | M_OMEGA=1 |
---|
494 | PARLIST[imax]=W |
---|
495 | PARNAME[imax]=135 |
---|
496 | REPR[imax]=SH |
---|
497 | UNIT[imax]=19 |
---|
498 | LTY[imax]=ML |
---|
499 | GRID[imax]=${D_GRID} |
---|
500 | LEVELIST[imax]=${M_LEVELIST} |
---|
501 | imax=$(($imax+1)) |
---|
502 | fi |
---|
503 | if [[ $M_ETA -eq 1 || $M_ETADIFF -eq 1 ]] ; then |
---|
504 | M_ETA=1 |
---|
505 | PARLIST[imax]=77 |
---|
506 | PARNAME[imax]=77 |
---|
507 | REPR[imax]=SH |
---|
508 | UNIT[imax]=21 |
---|
509 | LTY[imax]=ML |
---|
510 | GRID[imax]=${D_GRID} |
---|
511 | LEVELIST[imax]=${M_LEVELIST} |
---|
512 | imax=$(($imax+1)) |
---|
513 | fi |
---|
514 | |
---|
515 | if [[ $M_GAUSS -eq 2 ]] ; then |
---|
516 | PARLIST[imax]=VO |
---|
517 | PARNAME[imax]=138 |
---|
518 | REPR[imax]=SH |
---|
519 | UNIT[imax]=30 |
---|
520 | LTY[imax]=ML |
---|
521 | GRID[imax]=${G_GRID} |
---|
522 | LEVELIST[imax]=${G_LEVELIST} |
---|
523 | imax=$(($imax+1)) |
---|
524 | fi |
---|
525 | if [[ $M_ETA -eq 0 || $M_GAUSS -eq 1 || $M_ETADIFF -eq 1 ]] ; then |
---|
526 | PARLIST[imax]=D |
---|
527 | PARNAME[imax]=155 |
---|
528 | REPR[imax]=SH |
---|
529 | UNIT[imax]=13 |
---|
530 | LTY[imax]=ML |
---|
531 | GRID[imax]=${G_GRID} |
---|
532 | LEVELIST[imax]=${G_LEVELIST} |
---|
533 | LEVELIST[1]=${G_LEVELIST} # U/V needed on all levels for calculating ETA |
---|
534 | imax=$(($imax+1)) |
---|
535 | fi |
---|
536 | |
---|
537 | jmax=${#M_TYPE[*]} |
---|
538 | |
---|
539 | # M_TIME needs leading zeros while M_STEP must have leading zeros |
---|
540 | # to be consistent with MARS file naming convention |
---|
541 | # The following loop ensures this |
---|
542 | j=0 |
---|
543 | while [[ $j -lt $jmax ]] ; do |
---|
544 | if [[ ${M_TIME[$j]} -lt 10 ]] ; then |
---|
545 | M_TIME[$j]=0$((${M_TIME[$j]})) |
---|
546 | fi |
---|
547 | if [[ ${M_STEP[$j]} -lt 10 ]] ; then |
---|
548 | M_STEP[$j]=$((${M_STEP[$j]})) |
---|
549 | fi |
---|
550 | |
---|
551 | j=$(($j+1)) |
---|
552 | done |
---|
553 | |
---|
554 | echo ${M_TIME[*]} |
---|
555 | echo ${M_STEP[*]} |
---|
556 | |
---|
557 | |
---|
558 | rm mars_flux 2>/dev/null |
---|
559 | j=$DTIME |
---|
560 | while [[ $j -lt 13 ]] ; do |
---|
561 | marsflux ${M_TYPE[2]} ${FIELD[$j]} |
---|
562 | j=$(($j+$DTIME)) |
---|
563 | done |
---|
564 | mars mars_flux | grep -i -v 'MARS - INFO' |
---|
565 | [ $? -ne 0 ] && myerror "Job stopped because of failing MARS request" |
---|
566 | |
---|
567 | |
---|
568 | # |
---|
569 | # FLXACC job |
---|
570 | # |
---|
571 | |
---|
572 | |
---|
573 | ${EXEDIR}/FLXACC2 |
---|
574 | if [ -f OROLSM ] ; then |
---|
575 | rm OROLSM |
---|
576 | fi |
---|
577 | |
---|
578 | # |
---|
579 | # CONVERT job |
---|
580 | # |
---|
581 | |
---|
582 | #loop over DATE and TIME for CONVERT/CHECK/ECtrans job |
---|
583 | |
---|
584 | IJULDAY=${JULDAY1} |
---|
585 | while [ $IJULDAY -le $JULDAY2 ]; |
---|
586 | do |
---|
587 | |
---|
588 | MDATE=`civildate2 ${IJULDAY}` |
---|
589 | MDATEX=`echo ${MDATE} | cut -c3-8` |
---|
590 | |
---|
591 | |
---|
592 | i=0 |
---|
593 | rm marsjob 2>/dev/null |
---|
594 | |
---|
595 | #humidity on reduced Gaussian grid for initialization |
---|
596 | #of spectral transformations |
---|
597 | if [ ${M_GAUSS} -eq 1 ] ; then |
---|
598 | NGRID=$(( ( ${M_RESOL} + 1 ) / 2 )) |
---|
599 | |
---|
600 | marsinst ${M_TYPE[0]} ${DAY1} 00 00 Q fort.18 ML ${QG_GRID} 1 'GAUSSIAN=REDUCED,' |
---|
601 | |
---|
602 | set -e |
---|
603 | mars marsjob | grep -i -v 'MARS - INFO' |
---|
604 | [ $? -ne 0 ] && myerror "Job stopped because of failing MARS request" |
---|
605 | rm marsjob |
---|
606 | |
---|
607 | fi |
---|
608 | |
---|
609 | set -e |
---|
610 | |
---|
611 | set -A TYPEKEY ${M_TYPE[0]} |
---|
612 | j=$DTIME |
---|
613 | kmax=0 |
---|
614 | while [[ $j -lt $jmax ]] ; do |
---|
615 | if [[ ${M_TYPE[j]} != ${TYPEKEY[0]} ]] ; then |
---|
616 | if [[ $kmax == 1 ]] ; then |
---|
617 | if [[ ${M_TYPE[j]} != ${TYPEKEY[1]} ]] ; then |
---|
618 | set -A TYPEKEY ${TYPEKEY[0]} ${TYPEKEY[1]} ${M_TYPE[j]} |
---|
619 | kmax=2 |
---|
620 | fi |
---|
621 | else |
---|
622 | if [[ $kmax == 0 ]] ; then |
---|
623 | set -A TYPEKEY ${TYPEKEY[0]} ${M_TYPE[j]} |
---|
624 | kmax=1 |
---|
625 | else |
---|
626 | if [[ $kmax == 2 && ${M_TYPE[j]} != ${TYPEKEY[1]} ]] ; then |
---|
627 | if [[ $kmax == 2 && ${M_TYPE[j]} != ${TYPEKEY[2]} ]] ; then |
---|
628 | |
---|
629 | echo ${TYPEKEY[0]} ${TYPEKEY[1]} ${TYPEKEY[2]} ${M_TYPE[j]} |
---|
630 | myerror 'More than three different MARS TYPES not supported' |
---|
631 | |
---|
632 | exit 1 |
---|
633 | fi |
---|
634 | fi |
---|
635 | fi |
---|
636 | fi |
---|
637 | fi |
---|
638 | j=$(($j+$DTIME)) |
---|
639 | done |
---|
640 | |
---|
641 | set -A GRIDKEY $D_GRID |
---|
642 | mmax=1 |
---|
643 | i=0 |
---|
644 | while [[ $i -lt $imax ]] ; do |
---|
645 | if [[ ${GRID[$i]} == 'OFF' && ${PARLIST[$i]} != LNSP ]] ; then |
---|
646 | set -A GRIDKEY $D_GRID OFF |
---|
647 | mmax=2 |
---|
648 | fi |
---|
649 | i=$(($i+1)) |
---|
650 | done |
---|
651 | |
---|
652 | k=0 |
---|
653 | kmax=$(($kmax+1)) |
---|
654 | while [[ $k -lt $kmax ]] ; do |
---|
655 | MMTIME='' |
---|
656 | MMSTEP='' |
---|
657 | TSUFF='' |
---|
658 | SSUFF='' |
---|
659 | j=0 |
---|
660 | while [[ $j -lt $jmax ]] ; do |
---|
661 | if [[ ${M_TYPE[$j]} == ${TYPEKEY[$k]} ]] ; then |
---|
662 | if [[ `echo $MMTIME | grep ${M_TIME[$j]}` == '' ]] ; then |
---|
663 | MMTIME=${MMTIME}$TSUFF${M_TIME[$j]} |
---|
664 | TSUFF='/' |
---|
665 | fi |
---|
666 | if [[ `echo $MMSTEP | grep ${M_STEP[$j]}` == '' ]] ; then |
---|
667 | MMSTEP=${MMSTEP}$SSUFF${M_STEP[$j]} |
---|
668 | SSUFF='/' |
---|
669 | fi |
---|
670 | fi |
---|
671 | j=$(($j+$DTIME)) |
---|
672 | done |
---|
673 | |
---|
674 | m=0 |
---|
675 | while [[ $m -lt $mmax ]] ; do |
---|
676 | MMPAR='' |
---|
677 | PSUFF='' |
---|
678 | i=0 |
---|
679 | while [[ $i -lt $imax ]] ; do |
---|
680 | if [[ ${LTY[$i]} == ML && ${GRID[$i]} == ${GRIDKEY[m]} && ${PARLIST[$i]} != LNSP ]] ; then |
---|
681 | if [[ `echo $MMPAR | grep ${PARLIST[$i]}` == '' ]] ; then |
---|
682 | MMPAR=${MMPAR}$PSUFF${PARLIST[$i]} |
---|
683 | PSUFF='/' |
---|
684 | fi |
---|
685 | fi |
---|
686 | i=$(($i+1)) |
---|
687 | done |
---|
688 | |
---|
689 | marsinst ${TYPEKEY[$k]} ${MDATE} ${MMTIME} ${MMSTEP} $MMPAR "[param].[date].[time].[step]" ML ${GRIDKEY[$m]} ${LEVELIST[$m]} |
---|
690 | mars marsjob | grep -i -v 'MARS - INFO' |
---|
691 | [ $? -ne 0 ] && myerror "Job stopped because of failing MARS request" |
---|
692 | rm marsjob |
---|
693 | |
---|
694 | m=$(($m+1)) |
---|
695 | done |
---|
696 | |
---|
697 | # LNSP treated separately since it exists only on 1 level |
---|
698 | |
---|
699 | marsinst ${TYPEKEY[$k]} ${MDATE} ${MMTIME} ${MMSTEP} LNSP "[param].[date].[time].[step]" ML OFF 1 |
---|
700 | mars marsjob | grep -i -v 'MARS - INFO' |
---|
701 | [ $? -ne 0 ] && myerror "Job stopped because of failing MARS request" |
---|
702 | rm marsjob |
---|
703 | |
---|
704 | # For some data classes, MARS adds GRIB table number to parameter number, |
---|
705 | # e.g. for Temperature it is 130.128 instead of just 130 |
---|
706 | # |
---|
707 | set +e |
---|
708 | TNR=`ls 131*${MDATE}.${M_TIME[00]}00.${M_STEP[00]} | awk -F . '{print $2}' - | grep -v ${MDATE}`. |
---|
709 | set -e |
---|
710 | if [[ $TNR != '.' ]] ; then |
---|
711 | TNR=.$TNR |
---|
712 | fi |
---|
713 | |
---|
714 | # SURF treated separately since it exists only on 1 level |
---|
715 | |
---|
716 | marsinst ${TYPEKEY[$k]} ${MDATE} ${MMTIME} ${MMSTEP} ${PARLIST[4]} "SURF${TNR}[date].[time].[step]" SFC $D_GRID OFF |
---|
717 | mars marsjob | grep -i -v 'MARS - INFO' |
---|
718 | [ $? -ne 0 ] && myerror "Job stopped because of failing MARS request" |
---|
719 | rm marsjob |
---|
720 | |
---|
721 | # OROLSM treated separately since it exists only on 1 level |
---|
722 | |
---|
723 | marsinst ${TYPEKEY[$k]} ${MDATE} ${MMTIME} ${MMSTEP} ${PARLIST[5]} "OROLSM${TNR}[date].[time].[step]" SFC $D_GRID OFF |
---|
724 | mars marsjob | grep -i -v 'MARS - INFO' |
---|
725 | [ $? -ne 0 ] && myerror "Job stopped because of failing MARS request" |
---|
726 | rm marsjob |
---|
727 | |
---|
728 | k=$(($k+1)) |
---|
729 | done |
---|
730 | |
---|
731 | |
---|
732 | |
---|
733 | j=0 |
---|
734 | while [[ $j -lt $jmax ]] ; do |
---|
735 | |
---|
736 | |
---|
737 | TIME=${FIELD[j]} |
---|
738 | XTIME=${TIME}00 |
---|
739 | |
---|
740 | set +e |
---|
741 | i=0 |
---|
742 | while [[ $i -lt $imax ]] ; do |
---|
743 | \rm fort.${UNIT[$i]} 2>/dev/null |
---|
744 | if [[ ${PARLIST[$i]} == U/V ]] ; then |
---|
745 | cat 131${TNR}${MDATE}.${M_TIME[$j]}00.${M_STEP[$j]} 132${TNR}${MDATE}.${M_TIME[$j]}00.${M_STEP[$j]} > fort.${UNIT[$i]} |
---|
746 | rm 131${TNR}${MDATE}.${M_TIME[$j]}00.${M_STEP[$j]} 132${TNR}${MDATE}.${M_TIME[$j]}00.${M_STEP[$j]} |
---|
747 | else |
---|
748 | mv ${PARNAME[$i]}${TNR}${MDATE}.${M_TIME[$j]}00.${M_STEP[$j]} fort.${UNIT[$i]} |
---|
749 | fi |
---|
750 | i=$(($i+1)) |
---|
751 | done |
---|
752 | |
---|
753 | # flux data need special GRIB conversion |
---|
754 | #if [ ${M_FORMAT} == GRIB2 ] ; then |
---|
755 | # grib_set -w shortName!=lsp,shortName!=cp,shortName!=ewss,shortName!=nsss -s edition=2,productDefinitionTemplateNumber=8 flux${MDATE}${TIME} flux${MDATE}${TIME}.grib2 |
---|
756 | |
---|
757 | #else |
---|
758 | # mv flux${MDATE}${TIME} flux${MDATE}${TIME}.grib2 |
---|
759 | #fi |
---|
760 | |
---|
761 | ${EXEDIR}/CONVERT2 |
---|
762 | |
---|
763 | INFILE=${PREFIX}${MDATEX}${TIME} |
---|
764 | |
---|
765 | if [ -s fort.15 ]; then |
---|
766 | cp fort.15 ${INFILE} |
---|
767 | cat fort.14 >> ${INFILE} |
---|
768 | cat flux${MDATE}${TIME} >> ${INFILE} |
---|
769 | cat OROLSM >> ${INFILE} |
---|
770 | cat fort.20 >> ${INFILE} |
---|
771 | # |
---|
772 | # Convert also surface fields to GRIB2 if needed |
---|
773 | # |
---|
774 | # Note: GRIB2 surface fields are incompatible with FLEXPART versions < 9.2 |
---|
775 | # |
---|
776 | # To enable additional compression |
---|
777 | # set packingType="grid_jpeg"; |
---|
778 | # this is rather time consuming. |
---|
779 | |
---|
780 | if [ ${M_FORMAT} == GRIB2 ] ; then |
---|
781 | grib_set -s edition=2,productDefinitionTemplateNumber=8 $INFILE ${INFILE}_2 |
---|
782 | mv ${INFILE}_2 ${INFILE} |
---|
783 | |
---|
784 | if [ ${COMPRESSION} != grid_simple ] ; then |
---|
785 | |
---|
786 | cat >rule.filter<<EOF |
---|
787 | set packingType="${COMPRESSION}"; |
---|
788 | write "[file]_2"; |
---|
789 | EOF |
---|
790 | grib_filter rule.filter ${INFILE} |
---|
791 | mv ${INFILE}_2 ${INFILE} |
---|
792 | fi |
---|
793 | fi |
---|
794 | ls -l ${INFILE} |
---|
795 | |
---|
796 | |
---|
797 | else |
---|
798 | myerror "ERROR: ENfile ${INFILE} missing!" "ABORT!" |
---|
799 | exit 1 |
---|
800 | fi |
---|
801 | |
---|
802 | #check ENxxx file & ECtrans to local gateway |
---|
803 | if [ -s fort.25 ]; then |
---|
804 | mv fort.25 OMEGA${MDATEX}${TIME} |
---|
805 | ln -s OMEGA${MDATEX}${TIME} fort.25 |
---|
806 | fi |
---|
807 | |
---|
808 | |
---|
809 | \rm fort.15 2>/dev/null |
---|
810 | ln -s ${INFILE} fort.15 |
---|
811 | |
---|
812 | [ -s CHECK.SUCCESS ] && rm CHECK.SUCCESS |
---|
813 | |
---|
814 | ${EXEDIR}/CHECK |
---|
815 | |
---|
816 | #check fields |
---|
817 | if [ -s CHECK.SUCCESS ]; then |
---|
818 | SUCCESS=1 |
---|
819 | else |
---|
820 | myerror 'ERROR: check on ENfile failed:' ${INFILE} "ABORT!" |
---|
821 | exit 1 |
---|
822 | fi |
---|
823 | |
---|
824 | |
---|
825 | #ECtrans |
---|
826 | if [ $SUCCESS -eq 1 -a $ECTRANS -eq 1 ] ; then |
---|
827 | ectrans -overwrite -gateway ${GATEWAY} -remote ${DESTINATION} -source $INFILE |
---|
828 | fi |
---|
829 | |
---|
830 | if [[ $M_OMEGA -eq 1 && $SUCCESS -eq 1 && $ECTRANS -eq 1 ]] ; then |
---|
831 | ectrans -overwrite -gateway ${GATEWAY} -remote ${DESTINATION} -source OMEGA${MDATEX}${TIME} |
---|
832 | fi |
---|
833 | |
---|
834 | #ECFS |
---|
835 | if [ $SUCCESS -eq 1 -a $ECSTORAGE -eq 1 ] ; then |
---|
836 | ecp -o $INFILE $ECFSDIR |
---|
837 | fi |
---|
838 | |
---|
839 | if [[ $SUCCESS -eq 1 && $ECSTORAGE -eq 1 && $M_OMEGA -eq 1 ]] ; then |
---|
840 | ecp -o OMEGA${MDATEX}${TIME} $ECFSDIR |
---|
841 | fi |
---|
842 | |
---|
843 | rm ${INFILE}_2 ${INFILE} fort.15 flux${MDATE}${TIME}* OMEGA${MDATEX}${TIME} fort.25 |
---|
844 | |
---|
845 | j=$(($j+$DTIME)) |
---|
846 | |
---|
847 | #done TIME |
---|
848 | done |
---|
849 | |
---|
850 | (( IJULDAY = IJULDAY + 1 )) |
---|
851 | |
---|
852 | #done JULDAY |
---|
853 | done |
---|
854 | |
---|
855 | #any warnings ? |
---|
856 | [ $NRW -gt 0 ] && echo There were $NRW warnings ! |
---|
857 | |
---|
858 | #mail logfile (list MAILOPS) |
---|
859 | for MUSER in $MAILOPS |
---|
860 | do |
---|
861 | |
---|
862 | mailx -s ${JOBNAME} ${MUSER} <${LOG_FILE} |
---|
863 | done |
---|
864 | |
---|
865 | # |
---|
866 | # cleanup |
---|
867 | # |
---|
868 | cd ${SCRATCH} |
---|
869 | echo $SCRATCHDIR not removed! |
---|
870 | #\rm -fR $SCRATCHDIR |
---|
871 | |
---|
872 | exit 0 |
---|
873 | |
---|