ctbtodev
Last change
on this file since 8652e7e was
e585e1b,
checked in by Anne Philipp <anne.philipp@…>, 6 years ago
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new testrun
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-
Property mode set to
100644
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File size:
1.7 KB
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Rev | Line | |
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[34b247b] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | # ON ECGB: |
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| 4 | # start with ecaccess-job-submit -queueName ecgb NAME_OF_THIS_FILE on gateway server |
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| 5 | # start with sbatch NAME_OF_THIS_FILE directly on machine |
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| 6 | |
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| 7 | #SBATCH --workdir=/scratch/ms/at/km4a |
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| 8 | #SBATCH --qos=normal |
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| 9 | #SBATCH --job-name=flex_ecmwf |
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| 10 | #SBATCH --output=flex_ecmwf.%j.out |
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| 11 | #SBATCH --error=flex_ecmwf.%j.out |
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| 12 | #SBATCH --mail-type=FAIL |
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| 13 | #SBATCH --time=12:00:00 |
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| 14 | |
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| 15 | ## CRAY specific batch requests |
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| 16 | ##PBS -N flex_ecmwf |
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| 17 | ##PBS -q np |
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| 18 | ##PBS -S /usr/bin/ksh |
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| 19 | ## -o /scratch/ms/at/km4a/flex_ecmwf.${PBS_JOBID}.out |
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| 20 | ## job output is in .ecaccess_DO_NOT_REMOVE |
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| 21 | ##PBS -j oe |
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| 22 | ##PBS -V |
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| 23 | ##PBS -l EC_threads_per_task=24 |
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| 24 | ##PBS -l EC_memory_per_task=32000MB |
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| 25 | |
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| 26 | set -x |
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| 27 | export VERSION=7.1 |
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| 28 | case ${HOST} in |
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| 29 | *ecg*) |
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| 30 | module load python |
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| 31 | module unload grib_api |
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[c97d8ec] | 32 | module unload eccodes |
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[34b247b] | 33 | module unload emos |
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[e585e1b] | 34 | module load grib_api/1.26.1 |
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[c97d8ec] | 35 | module load emos/457-r64 |
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[34b247b] | 36 | export PATH=${PATH}:${HOME}/flex_extract_v7.1/source/python |
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| 37 | ;; |
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| 38 | *cca*) |
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| 39 | module switch PrgEnv-cray PrgEnv-intel |
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| 40 | module load grib_api |
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| 41 | module load emos |
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| 42 | module load python |
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| 43 | export SCRATCH=${TMPDIR} |
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| 44 | export PATH=${PATH}:${HOME}/flex_extract_v7.1/source/python |
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| 45 | ;; |
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| 46 | esac |
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| 47 | |
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| 48 | cd ${SCRATCH} |
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| 49 | mkdir -p python$$ |
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| 50 | cd python$$ |
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| 51 | |
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| 52 | export CONTROL=CONTROL |
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| 53 | |
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| 54 | cat >${CONTROL}<<EOF |
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| 55 | EOF |
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| 56 | |
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| 57 | |
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| 58 | submit.py --controlfile=${CONTROL} --inputdir=./work --outputdir=./work 1> prot 2>&1 |
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| 59 | |
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| 60 | if [ $? -eq 0 ] ; then |
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| 61 | l=0 |
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| 62 | for muser in `grep -i MAILOPS ${CONTROL}`; do |
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| 63 | if [ ${l} -gt 0 ] ; then |
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| 64 | mail -s flex.${HOST}.$$ ${muser} <prot |
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| 65 | fi |
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| 66 | l=$((${l}+1)) |
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| 67 | done |
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| 68 | else |
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| 69 | l=0 |
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| 70 | for muser in `grep -i MAILFAIL ${CONTROL}`; do |
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| 71 | if [ ${l} -gt 0 ] ; then |
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| 72 | mail -s "ERROR! flex.${HOST}.$$" ${muser} <prot |
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| 73 | fi |
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| 74 | l=$((${l}+1)) |
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| 75 | done |
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| 76 | fi |
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| 77 | |
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