1 | #!/bin/ksh |
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2 | |
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3 | # ON ECGB: |
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4 | # start with ecaccess-job-submit -queueName ecgb NAME_OF_THIS_FILE on gateway server |
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5 | # start with sbatch NAME_OF_THIS_FILE directly on machine |
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6 | |
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7 | #SBATCH --workdir=/scratch/ms/at/km4a |
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8 | #SBATCH --qos=normal |
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9 | #SBATCH --job-name=flex_ecmwf |
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10 | #SBATCH --output=flex_ecmwf.%j.out |
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11 | #SBATCH --error=flex_ecmwf.%j.out |
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12 | #SBATCH --mail-type=FAIL |
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13 | #SBATCH --time=12:00:00 |
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14 | |
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15 | ## CRAY specific batch requests |
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16 | ##PBS -N flex_ecmwf |
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17 | ##PBS -q np |
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18 | ##PBS -S /usr/bin/ksh |
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19 | ## -o /scratch/ms/at/km4a/flex_ecmwf.${PBS_JOBID}.out |
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20 | ## job output is in .ecaccess_DO_NOT_REMOVE |
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21 | ##PBS -j oe |
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22 | ##PBS -V |
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23 | ##PBS -l EC_threads_per_task=24 |
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24 | ##PBS -l EC_memory_per_task=32000MB |
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25 | |
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26 | set -x |
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27 | export VERSION=7.1 |
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28 | case ${HOST} in |
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29 | *ecg*) |
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30 | module load python |
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31 | module unload grib_api |
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32 | module unload eccodes |
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33 | module unload emos |
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34 | # module load grib_api/1.27.0 |
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35 | module load grib_api/1.14.5 |
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36 | module load emos/457-r64 |
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37 | export PATH=${PATH}:${HOME}/flex_extract_v7.1/source/python |
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38 | ;; |
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39 | *cca*) |
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40 | module switch PrgEnv-cray PrgEnv-intel |
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41 | module load grib_api |
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42 | module load emos |
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43 | module load python |
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44 | export SCRATCH=${TMPDIR} |
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45 | export PATH=${PATH}:${HOME}/flex_extract_v7.1/source/python |
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46 | ;; |
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47 | esac |
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48 | |
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49 | cd ${SCRATCH} |
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50 | mkdir -p python$$ |
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51 | cd python$$ |
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52 | |
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53 | export CONTROL=CONTROL |
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54 | |
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55 | cat >${CONTROL}<<EOF |
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56 | accmaxstep 12 |
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57 | acctime 06/18 |
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58 | acctype FC |
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59 | accuracy 24 |
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60 | addpar 186 187 188 235 139 39 |
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61 | area |
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62 | basetime None |
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63 | controlfile CONTROL_EA5.testgrid |
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64 | cwc 0 |
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65 | dataset None |
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66 | date_chunk 3 |
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67 | debug 1 |
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68 | destination annep@genericSftp |
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69 | dpdeta 1 |
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70 | dtime 1 |
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71 | ecfsdir ectmp:/${USER}/econdemand/ |
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72 | ecgid at |
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73 | ecstorage 0 |
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74 | ectrans 1 |
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75 | ecuid km4a |
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76 | end_date 20090108 |
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77 | eta 1 |
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78 | etadiff 0 |
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79 | etapar 77 |
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80 | expver 1 |
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81 | format GRIB1 |
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82 | gateway srvx8.img.univie.ac.at |
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83 | gauss 0 |
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84 | gaussian |
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85 | grib2flexpart 0 |
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86 | grid 1000 |
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87 | inputdir /raid60/nas/tmc/Anne/Interpolation/flexextract/flex_extract_v7.1/run/workspace |
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88 | install_target None |
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89 | job_template job.temp |
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90 | left -5000 |
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91 | level 137 |
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92 | levelist 100/to/137 |
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93 | logicals gauss omega omegadiff eta etadiff dpdeta cwc wrf grib2flexpart ecstorage ectrans debug request public |
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94 | lower 10000 |
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95 | mailfail ${USER} |
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96 | mailops ${USER} |
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97 | makefile Makefile.gfortran |
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98 | marsclass EA |
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99 | maxstep 0 |
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100 | number OFF |
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101 | omega 0 |
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102 | omegadiff 0 |
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103 | outputdir /raid60/nas/tmc/Anne/Interpolation/flexextract/flex_extract_v7.1/run/workspace |
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104 | prefix EA |
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105 | public 0 |
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106 | queue ecgate |
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107 | request 2 |
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108 | resol 159 |
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109 | right 5000 |
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110 | smooth 0 |
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111 | start_date 20090108 |
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112 | step 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 |
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113 | stream OPER |
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114 | time 00 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 |
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115 | type AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN |
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116 | upper 20000 |
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117 | wrf 0 |
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118 | EOF |
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119 | |
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120 | |
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121 | submit.py --controlfile=${CONTROL} --inputdir=./work --outputdir=./work 1> prot 2>&1 |
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122 | |
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123 | if [ $? -eq 0 ] ; then |
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124 | l=0 |
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125 | for muser in `grep -i MAILOPS ${CONTROL}`; do |
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126 | if [ ${l} -gt 0 ] ; then |
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127 | mail -s flex.${HOST}.$$ ${muser} <prot |
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128 | fi |
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129 | l=$((${l}+1)) |
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130 | done |
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131 | else |
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132 | l=0 |
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133 | for muser in `grep -i MAILFAIL ${CONTROL}`; do |
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134 | if [ ${l} -gt 0 ] ; then |
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135 | mail -s "ERROR! flex.${HOST}.$$" ${muser} <prot |
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136 | fi |
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137 | l=$((${l}+1)) |
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138 | done |
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139 | fi |
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140 | |
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