[d69b677] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | # ON ECGB: |
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| 4 | # start with ecaccess-job-submit -queueName ecgb NAME_OF_THIS_FILE on gateway server |
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| 5 | # start with sbatch NAME_OF_THIS_FILE directly on machine |
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| 6 | |
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[efdb01a] | 7 | #SBATCH --workdir=/scratch/ms/at/km4a |
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[d69b677] | 8 | #SBATCH --qos=normal |
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| 9 | #SBATCH --job-name=flex_ecmwf |
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| 10 | #SBATCH --output=flex_ecmwf.%j.out |
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| 11 | #SBATCH --error=flex_ecmwf.%j.out |
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| 12 | #SBATCH --mail-type=FAIL |
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| 13 | #SBATCH --time=12:00:00 |
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| 14 | |
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| 15 | ## CRAY specific batch requests |
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| 16 | ##PBS -N flex_ecmwf |
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| 17 | ##PBS -q np |
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| 18 | ##PBS -S /usr/bin/ksh |
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| 19 | ## -o /scratch/ms/spatlh00/lh0/flex_ecmwf.$PBS_JOBID.out |
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| 20 | ## job output is in .ecaccess_DO_NOT_REMOVE |
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| 21 | ##PBS -j oe |
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| 22 | ##PBS -V |
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| 23 | ##PBS -l EC_threads_per_task=24 |
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| 24 | ##PBS -l EC_memory_per_task=32000MB |
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| 25 | |
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| 26 | set -x |
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[efdb01a] | 27 | export VERSION=7.1 |
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[d69b677] | 28 | case $HOST in |
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| 29 | *ecg*) |
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| 30 | module load python |
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| 31 | module unload grib_api |
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| 32 | module unload emos |
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| 33 | module load grib_api/1.14.5 |
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| 34 | module load emos/437-r64 |
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[ca867de] | 35 | export PATH=${PATH}:${HOME}/flex_extract_v7.1/source/python |
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[d69b677] | 36 | ;; |
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| 37 | *cca*) |
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| 38 | module switch PrgEnv-cray PrgEnv-intel |
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| 39 | module load grib_api |
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| 40 | module load emos |
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| 41 | module load python |
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| 42 | export SCRATCH=$TMPDIR |
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[ca867de] | 43 | export PATH=${PATH}:${HOME}/flex_extract_v7.1/source/python |
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[d69b677] | 44 | ;; |
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| 45 | esac |
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| 46 | |
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| 47 | cd $SCRATCH |
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| 48 | mkdir -p python$$ |
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| 49 | cd python$$ |
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| 50 | |
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[ca867de] | 51 | export CONTROL=CONTROL |
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[d69b677] | 52 | |
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| 53 | cat >$CONTROL<<EOF |
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[ca867de] | 54 | accuracy 16 |
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[d69b677] | 55 | addpar 186 187 188 235 139 39 |
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[54a8a01] | 56 | area |
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[d69b677] | 57 | basetime None |
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[ca867de] | 58 | controlfile CONTROL.temp |
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[d69b677] | 59 | cwc 0 |
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| 60 | date_chunk 3 |
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[2fb99de] | 61 | debug 1 |
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[54a8a01] | 62 | destination annep@genericSftp |
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[d69b677] | 63 | dpdeta 1 |
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| 64 | dtime 3 |
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| 65 | ecfsdir ectmp:/${USER}/econdemand/ |
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[54a8a01] | 66 | ecgid at |
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[efdb01a] | 67 | ecstorage 0 |
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[ccab809] | 68 | ectrans 1 |
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[54a8a01] | 69 | ecuid km4a |
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[ca867de] | 70 | end_date 20120908 |
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[d69b677] | 71 | eta 0 |
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| 72 | etadiff 0 |
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[54a8a01] | 73 | etapar 77 |
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[d69b677] | 74 | expver 1 |
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| 75 | format GRIB1 |
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[54a8a01] | 76 | gateway srvx8.img.univie.ac.at |
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[d69b677] | 77 | gauss 1 |
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| 78 | grib2flexpart 0 |
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| 79 | grid 5000 |
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[ca867de] | 80 | inputdir ../../run/workspace/test |
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[54a8a01] | 81 | install_target None |
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| 82 | job_template job.temp |
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[ca867de] | 83 | left -15000 |
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[d69b677] | 84 | level 60 |
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[ca867de] | 85 | levelist 40/to/60 |
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[2fb99de] | 86 | logicals gauss omega omegadiff eta etadiff dpdeta cwc wrf grib2flexpart ecstorage ectrans debug request |
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[efdb01a] | 87 | lower 30000 |
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[54a8a01] | 88 | mailfail ${USER} |
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| 89 | mailops ${USER} |
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[2fb99de] | 90 | makefile Makefile.gfortran |
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[d69b677] | 91 | marsclass EI |
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| 92 | maxstep 11 |
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| 93 | number OFF |
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| 94 | omega 0 |
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| 95 | omegadiff 0 |
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[ca867de] | 96 | outputdir ../../run/workspace/test |
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| 97 | ppid 41511 |
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| 98 | prefix EI |
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| 99 | queue local |
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[25b14be] | 100 | request 1 |
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[d69b677] | 101 | resol 63 |
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[ca867de] | 102 | right 45000 |
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[d69b677] | 103 | smooth 0 |
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[ca867de] | 104 | start_date 20120908 |
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[d69b677] | 105 | step 00 01 02 03 04 05 00 07 08 09 10 11 00 01 02 03 04 05 00 07 08 09 10 11 |
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| 106 | stream OPER |
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| 107 | time 00 00 00 00 00 00 06 00 00 00 00 00 12 12 12 12 12 12 18 12 12 12 12 12 |
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| 108 | type AN FC FC FC FC FC AN FC FC FC FC FC AN FC FC FC FC FC AN FC FC FC FC FC |
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[ca867de] | 109 | upper 75000 |
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[54a8a01] | 110 | wrf 0 |
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[d69b677] | 111 | EOF |
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| 112 | |
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| 113 | |
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[efdb01a] | 114 | submit.py --controlfile=$CONTROL --inputdir=./work --outputdir=./work 1> prot 2>&1 |
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[d69b677] | 115 | |
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| 116 | if [ $? -eq 0 ] ; then |
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| 117 | l=0 |
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| 118 | for muser in `grep -i MAILOPS $CONTROL`; do |
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| 119 | if [ $l -gt 0 ] ; then |
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| 120 | mail -s flex.${HOST}.$$ $muser <prot |
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| 121 | fi |
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| 122 | l=$(($l+1)) |
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| 123 | done |
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| 124 | else |
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| 125 | l=0 |
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| 126 | for muser in `grep -i MAILFAIL $CONTROL`; do |
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| 127 | if [ $l -gt 0 ] ; then |
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| 128 | mail -s "ERROR! flex.${HOST}.$$" $muser <prot |
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| 129 | fi |
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| 130 | l=$(($l+1)) |
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| 131 | done |
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| 132 | fi |
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| 133 | |
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