[d69b677] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | # ON ECGB: |
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| 4 | # start with ecaccess-job-submit -queueName ecgb NAME_OF_THIS_FILE on gateway server |
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| 5 | # start with sbatch NAME_OF_THIS_FILE directly on machine |
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| 6 | |
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[efdb01a] | 7 | #SBATCH --workdir=/scratch/ms/at/km4a |
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[d69b677] | 8 | #SBATCH --qos=normal |
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| 9 | #SBATCH --job-name=flex_ecmwf |
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| 10 | #SBATCH --output=flex_ecmwf.%j.out |
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| 11 | #SBATCH --error=flex_ecmwf.%j.out |
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| 12 | #SBATCH --mail-type=FAIL |
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| 13 | #SBATCH --time=12:00:00 |
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| 14 | |
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| 15 | ## CRAY specific batch requests |
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| 16 | ##PBS -N flex_ecmwf |
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| 17 | ##PBS -q np |
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| 18 | ##PBS -S /usr/bin/ksh |
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[34b247b] | 19 | ## -o /scratch/ms/at/km4a/flex_ecmwf.${PBS_JOBID}.out |
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[d69b677] | 20 | ## job output is in .ecaccess_DO_NOT_REMOVE |
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| 21 | ##PBS -j oe |
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| 22 | ##PBS -V |
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| 23 | ##PBS -l EC_threads_per_task=24 |
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| 24 | ##PBS -l EC_memory_per_task=32000MB |
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| 25 | |
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| 26 | set -x |
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[efdb01a] | 27 | export VERSION=7.1 |
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[34b247b] | 28 | case ${HOST} in |
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[d69b677] | 29 | *ecg*) |
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| 30 | module load python |
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| 31 | module unload grib_api |
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[c97d8ec] | 32 | module unload eccodes |
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[d69b677] | 33 | module unload emos |
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[c97d8ec] | 34 | module load grib_api/1.27.0 |
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| 35 | module load emos/457-r64 |
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[ca867de] | 36 | export PATH=${PATH}:${HOME}/flex_extract_v7.1/source/python |
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[d69b677] | 37 | ;; |
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| 38 | *cca*) |
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| 39 | module switch PrgEnv-cray PrgEnv-intel |
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| 40 | module load grib_api |
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| 41 | module load emos |
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| 42 | module load python |
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[34b247b] | 43 | export SCRATCH=${TMPDIR} |
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[ca867de] | 44 | export PATH=${PATH}:${HOME}/flex_extract_v7.1/source/python |
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[d69b677] | 45 | ;; |
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| 46 | esac |
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| 47 | |
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[34b247b] | 48 | cd ${SCRATCH} |
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[d69b677] | 49 | mkdir -p python$$ |
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| 50 | cd python$$ |
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| 51 | |
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[ca867de] | 52 | export CONTROL=CONTROL |
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[d69b677] | 53 | |
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[34b247b] | 54 | cat >${CONTROL}<<EOF |
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[c97d8ec] | 55 | accmaxstep 12 |
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| 56 | acctime 06/18 |
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[34b247b] | 57 | acctype FC |
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| 58 | accuracy 24 |
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[c97d8ec] | 59 | addpar 186 187 188 235 139 39 |
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[54a8a01] | 60 | area |
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[d69b677] | 61 | basetime None |
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[c97d8ec] | 62 | controlfile CONTROL_EA5.testgrid |
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| 63 | cwc 0 |
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[34b247b] | 64 | dataset None |
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[d69b677] | 65 | date_chunk 3 |
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[2fb99de] | 66 | debug 1 |
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[54a8a01] | 67 | destination annep@genericSftp |
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[d69b677] | 68 | dpdeta 1 |
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[c97d8ec] | 69 | dtime 1 |
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[d69b677] | 70 | ecfsdir ectmp:/${USER}/econdemand/ |
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[54a8a01] | 71 | ecgid at |
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[efdb01a] | 72 | ecstorage 0 |
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[ccab809] | 73 | ectrans 1 |
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[54a8a01] | 74 | ecuid km4a |
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[40408cb] | 75 | end_date 20090108 |
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[34b247b] | 76 | eta 1 |
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[d69b677] | 77 | etadiff 0 |
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[54a8a01] | 78 | etapar 77 |
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[d69b677] | 79 | expver 1 |
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| 80 | format GRIB1 |
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[54a8a01] | 81 | gateway srvx8.img.univie.ac.at |
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[34b247b] | 82 | gauss 0 |
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| 83 | gaussian |
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[d69b677] | 84 | grib2flexpart 0 |
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[c97d8ec] | 85 | grid 1000 |
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[34b247b] | 86 | inputdir /raid60/nas/tmc/Anne/Interpolation/flexextract/flex_extract_v7.1/run/workspace |
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[54a8a01] | 87 | install_target None |
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| 88 | job_template job.temp |
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[c97d8ec] | 89 | left -5000 |
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| 90 | level 137 |
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| 91 | levelist 100/to/137 |
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[34b247b] | 92 | logicals gauss omega omegadiff eta etadiff dpdeta cwc wrf grib2flexpart ecstorage ectrans debug request public |
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[c97d8ec] | 93 | lower 10000 |
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[54a8a01] | 94 | mailfail ${USER} |
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| 95 | mailops ${USER} |
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[2fb99de] | 96 | makefile Makefile.gfortran |
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[c97d8ec] | 97 | marsclass EA |
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[34b247b] | 98 | maxstep 0 |
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[d69b677] | 99 | number OFF |
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| 100 | omega 0 |
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| 101 | omegadiff 0 |
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[34b247b] | 102 | outputdir /raid60/nas/tmc/Anne/Interpolation/flexextract/flex_extract_v7.1/run/workspace |
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[c97d8ec] | 103 | prefix EA |
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[34b247b] | 104 | public 0 |
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| 105 | queue ecgate |
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| 106 | request 2 |
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[c97d8ec] | 107 | resol 159 |
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| 108 | right 5000 |
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[d69b677] | 109 | smooth 0 |
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[40408cb] | 110 | start_date 20090108 |
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[c97d8ec] | 111 | step 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 |
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| 112 | stream OPER |
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| 113 | time 00 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 |
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| 114 | type AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN |
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| 115 | upper 20000 |
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[54a8a01] | 116 | wrf 0 |
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[d69b677] | 117 | EOF |
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| 118 | |
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| 119 | |
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[34b247b] | 120 | submit.py --controlfile=${CONTROL} --inputdir=./work --outputdir=./work 1> prot 2>&1 |
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[d69b677] | 121 | |
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| 122 | if [ $? -eq 0 ] ; then |
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| 123 | l=0 |
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[34b247b] | 124 | for muser in `grep -i MAILOPS ${CONTROL}`; do |
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| 125 | if [ ${l} -gt 0 ] ; then |
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| 126 | mail -s flex.${HOST}.$$ ${muser} <prot |
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[d69b677] | 127 | fi |
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[34b247b] | 128 | l=$((${l}+1)) |
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[d69b677] | 129 | done |
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| 130 | else |
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| 131 | l=0 |
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[34b247b] | 132 | for muser in `grep -i MAILFAIL ${CONTROL}`; do |
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| 133 | if [ ${l} -gt 0 ] ; then |
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| 134 | mail -s "ERROR! flex.${HOST}.$$" ${muser} <prot |
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[d69b677] | 135 | fi |
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[34b247b] | 136 | l=$((${l}+1)) |
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[d69b677] | 137 | done |
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| 138 | fi |
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| 139 | |
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