[d69b677] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | # ON ECGB: |
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| 4 | # start with ecaccess-job-submit -queueName ecgb NAME_OF_THIS_FILE on gateway server |
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| 5 | # start with sbatch NAME_OF_THIS_FILE directly on machine |
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| 6 | |
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[efdb01a] | 7 | #SBATCH --workdir=/scratch/ms/at/km4a |
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[d69b677] | 8 | #SBATCH --qos=normal |
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| 9 | #SBATCH --job-name=flex_ecmwf |
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| 10 | #SBATCH --output=flex_ecmwf.%j.out |
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| 11 | #SBATCH --error=flex_ecmwf.%j.out |
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| 12 | #SBATCH --mail-type=FAIL |
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| 13 | #SBATCH --time=12:00:00 |
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| 14 | |
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| 15 | ## CRAY specific batch requests |
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| 16 | ##PBS -N flex_ecmwf |
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| 17 | ##PBS -q np |
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| 18 | ##PBS -S /usr/bin/ksh |
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[34b247b] | 19 | ## -o /scratch/ms/at/km4a/flex_ecmwf.${PBS_JOBID}.out |
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[d69b677] | 20 | ## job output is in .ecaccess_DO_NOT_REMOVE |
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| 21 | ##PBS -j oe |
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| 22 | ##PBS -V |
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| 23 | ##PBS -l EC_threads_per_task=24 |
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| 24 | ##PBS -l EC_memory_per_task=32000MB |
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| 25 | |
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| 26 | set -x |
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[efdb01a] | 27 | export VERSION=7.1 |
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[34b247b] | 28 | case ${HOST} in |
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[d69b677] | 29 | *ecg*) |
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| 30 | module load python |
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| 31 | module unload grib_api |
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[c97d8ec] | 32 | module unload eccodes |
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[d69b677] | 33 | module unload emos |
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[e585e1b] | 34 | # module load grib_api/1.27.0 |
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| 35 | module load grib_api/1.14.5 |
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[c97d8ec] | 36 | module load emos/457-r64 |
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[ca867de] | 37 | export PATH=${PATH}:${HOME}/flex_extract_v7.1/source/python |
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[d69b677] | 38 | ;; |
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| 39 | *cca*) |
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| 40 | module switch PrgEnv-cray PrgEnv-intel |
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| 41 | module load grib_api |
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| 42 | module load emos |
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| 43 | module load python |
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[34b247b] | 44 | export SCRATCH=${TMPDIR} |
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[ca867de] | 45 | export PATH=${PATH}:${HOME}/flex_extract_v7.1/source/python |
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[d69b677] | 46 | ;; |
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| 47 | esac |
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| 48 | |
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[34b247b] | 49 | cd ${SCRATCH} |
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[d69b677] | 50 | mkdir -p python$$ |
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| 51 | cd python$$ |
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| 52 | |
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[ca867de] | 53 | export CONTROL=CONTROL |
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[d69b677] | 54 | |
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[34b247b] | 55 | cat >${CONTROL}<<EOF |
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[c97d8ec] | 56 | accmaxstep 12 |
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| 57 | acctime 06/18 |
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[34b247b] | 58 | acctype FC |
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| 59 | accuracy 24 |
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[c97d8ec] | 60 | addpar 186 187 188 235 139 39 |
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[54a8a01] | 61 | area |
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[d69b677] | 62 | basetime None |
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[c97d8ec] | 63 | controlfile CONTROL_EA5.testgrid |
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| 64 | cwc 0 |
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[34b247b] | 65 | dataset None |
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[d69b677] | 66 | date_chunk 3 |
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[2fb99de] | 67 | debug 1 |
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[54a8a01] | 68 | destination annep@genericSftp |
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[d69b677] | 69 | dpdeta 1 |
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[c97d8ec] | 70 | dtime 1 |
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[d69b677] | 71 | ecfsdir ectmp:/${USER}/econdemand/ |
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[54a8a01] | 72 | ecgid at |
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[efdb01a] | 73 | ecstorage 0 |
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[ccab809] | 74 | ectrans 1 |
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[54a8a01] | 75 | ecuid km4a |
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[40408cb] | 76 | end_date 20090108 |
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[34b247b] | 77 | eta 1 |
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[d69b677] | 78 | etadiff 0 |
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[54a8a01] | 79 | etapar 77 |
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[d69b677] | 80 | expver 1 |
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| 81 | format GRIB1 |
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[54a8a01] | 82 | gateway srvx8.img.univie.ac.at |
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[34b247b] | 83 | gauss 0 |
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| 84 | gaussian |
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[d69b677] | 85 | grib2flexpart 0 |
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[c97d8ec] | 86 | grid 1000 |
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[34b247b] | 87 | inputdir /raid60/nas/tmc/Anne/Interpolation/flexextract/flex_extract_v7.1/run/workspace |
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[54a8a01] | 88 | install_target None |
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| 89 | job_template job.temp |
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[c97d8ec] | 90 | left -5000 |
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| 91 | level 137 |
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| 92 | levelist 100/to/137 |
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[34b247b] | 93 | logicals gauss omega omegadiff eta etadiff dpdeta cwc wrf grib2flexpart ecstorage ectrans debug request public |
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[c97d8ec] | 94 | lower 10000 |
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[54a8a01] | 95 | mailfail ${USER} |
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| 96 | mailops ${USER} |
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[2fb99de] | 97 | makefile Makefile.gfortran |
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[c97d8ec] | 98 | marsclass EA |
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[34b247b] | 99 | maxstep 0 |
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[d69b677] | 100 | number OFF |
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| 101 | omega 0 |
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| 102 | omegadiff 0 |
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[34b247b] | 103 | outputdir /raid60/nas/tmc/Anne/Interpolation/flexextract/flex_extract_v7.1/run/workspace |
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[c97d8ec] | 104 | prefix EA |
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[34b247b] | 105 | public 0 |
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| 106 | queue ecgate |
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| 107 | request 2 |
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[c97d8ec] | 108 | resol 159 |
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| 109 | right 5000 |
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[d69b677] | 110 | smooth 0 |
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[40408cb] | 111 | start_date 20090108 |
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[c97d8ec] | 112 | step 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 |
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| 113 | stream OPER |
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| 114 | time 00 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 |
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| 115 | type AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN |
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| 116 | upper 20000 |
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[54a8a01] | 117 | wrf 0 |
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[d69b677] | 118 | EOF |
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| 119 | |
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| 120 | |
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[34b247b] | 121 | submit.py --controlfile=${CONTROL} --inputdir=./work --outputdir=./work 1> prot 2>&1 |
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[d69b677] | 122 | |
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| 123 | if [ $? -eq 0 ] ; then |
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| 124 | l=0 |
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[34b247b] | 125 | for muser in `grep -i MAILOPS ${CONTROL}`; do |
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| 126 | if [ ${l} -gt 0 ] ; then |
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| 127 | mail -s flex.${HOST}.$$ ${muser} <prot |
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[d69b677] | 128 | fi |
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[34b247b] | 129 | l=$((${l}+1)) |
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[d69b677] | 130 | done |
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| 131 | else |
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| 132 | l=0 |
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[34b247b] | 133 | for muser in `grep -i MAILFAIL ${CONTROL}`; do |
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| 134 | if [ ${l} -gt 0 ] ; then |
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| 135 | mail -s "ERROR! flex.${HOST}.$$" ${muser} <prot |
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[d69b677] | 136 | fi |
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[34b247b] | 137 | l=$((${l}+1)) |
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[d69b677] | 138 | done |
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| 139 | fi |
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| 140 | |
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