[d69b677] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | # ON ECGB: |
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| 4 | # start with ecaccess-job-submit -queueName ecgb NAME_OF_THIS_FILE on gateway server |
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| 5 | # start with sbatch NAME_OF_THIS_FILE directly on machine |
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| 6 | |
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[efdb01a] | 7 | #SBATCH --workdir=/scratch/ms/at/km4a |
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[d69b677] | 8 | #SBATCH --qos=normal |
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| 9 | #SBATCH --job-name=flex_ecmwf |
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| 10 | #SBATCH --output=flex_ecmwf.%j.out |
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| 11 | #SBATCH --error=flex_ecmwf.%j.out |
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| 12 | #SBATCH --mail-type=FAIL |
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| 13 | #SBATCH --time=12:00:00 |
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| 14 | |
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| 15 | ## CRAY specific batch requests |
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| 16 | ##PBS -N flex_ecmwf |
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| 17 | ##PBS -q np |
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| 18 | ##PBS -S /usr/bin/ksh |
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[34b247b] | 19 | ## -o /scratch/ms/at/km4a/flex_ecmwf.${PBS_JOBID}.out |
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[d69b677] | 20 | ## job output is in .ecaccess_DO_NOT_REMOVE |
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| 21 | ##PBS -j oe |
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| 22 | ##PBS -V |
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| 23 | ##PBS -l EC_threads_per_task=24 |
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| 24 | ##PBS -l EC_memory_per_task=32000MB |
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| 25 | |
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| 26 | set -x |
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[efdb01a] | 27 | export VERSION=7.1 |
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[34b247b] | 28 | case ${HOST} in |
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[d69b677] | 29 | *ecg*) |
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| 30 | module load python |
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| 31 | module unload grib_api |
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[c97d8ec] | 32 | module unload eccodes |
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[b02a07e] | 33 | module load eccodes |
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[d69b677] | 34 | module unload emos |
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[b02a07e] | 35 | module load emos/455-r64 |
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[ca867de] | 36 | export PATH=${PATH}:${HOME}/flex_extract_v7.1/source/python |
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[d69b677] | 37 | ;; |
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| 38 | *cca*) |
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| 39 | module switch PrgEnv-cray PrgEnv-intel |
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[b02a07e] | 40 | module load eccodes |
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[d69b677] | 41 | module load emos |
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| 42 | module load python |
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[34b247b] | 43 | export SCRATCH=${TMPDIR} |
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[ca867de] | 44 | export PATH=${PATH}:${HOME}/flex_extract_v7.1/source/python |
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[d69b677] | 45 | ;; |
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| 46 | esac |
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| 47 | |
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[34b247b] | 48 | cd ${SCRATCH} |
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[d69b677] | 49 | mkdir -p python$$ |
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| 50 | cd python$$ |
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| 51 | |
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[ca867de] | 52 | export CONTROL=CONTROL |
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[d69b677] | 53 | |
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[34b247b] | 54 | cat >${CONTROL}<<EOF |
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[c97d8ec] | 55 | accmaxstep 12 |
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[b02a07e] | 56 | acctime 00/12 |
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[34b247b] | 57 | acctype FC |
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| 58 | accuracy 24 |
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[b02a07e] | 59 | addpar /186/187/188/235/139/39 |
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| 60 | area 61.2/-10.0/36.0/32.0 |
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[d69b677] | 61 | basetime None |
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[b02a07e] | 62 | controlfile CONTROL_OD.fastnet |
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[c97d8ec] | 63 | cwc 0 |
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[34b247b] | 64 | dataset None |
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[d69b677] | 65 | date_chunk 3 |
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[b02a07e] | 66 | debug 0 |
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[54a8a01] | 67 | destination annep@genericSftp |
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[d69b677] | 68 | dpdeta 1 |
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[c97d8ec] | 69 | dtime 1 |
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[b02a07e] | 70 | ecapi None |
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[d69b677] | 71 | ecfsdir ectmp:/${USER}/econdemand/ |
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[54a8a01] | 72 | ecgid at |
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[efdb01a] | 73 | ecstorage 0 |
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[ccab809] | 74 | ectrans 1 |
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[54a8a01] | 75 | ecuid km4a |
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[df87f0c] | 76 | end_date 20190215 |
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[34b247b] | 77 | eta 1 |
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[d69b677] | 78 | etadiff 0 |
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[54a8a01] | 79 | etapar 77 |
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[d69b677] | 80 | expver 1 |
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[b02a07e] | 81 | format GRIB2 |
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[54a8a01] | 82 | gateway srvx8.img.univie.ac.at |
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[34b247b] | 83 | gauss 0 |
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| 84 | gaussian |
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[d69b677] | 85 | grib2flexpart 0 |
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[b02a07e] | 86 | grid 0.1/0.1 |
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[df87f0c] | 87 | inputdir /raid60/nas/tmc/Anne/Interpolation/Mergeflexextract/flexextract/run/workspace |
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[54a8a01] | 88 | install_target None |
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[b02a07e] | 89 | job_chunk 1 |
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[54a8a01] | 90 | job_template job.temp |
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[b02a07e] | 91 | left -10.0 |
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[c97d8ec] | 92 | level 137 |
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[b02a07e] | 93 | levelist 1/to/137 |
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| 94 | logicals gauss omega omegadiff eta etadiff dpdeta cwc wrf grib2flexpart ecstorage ectrans debug oper request public purefc rrint |
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| 95 | lower 36.0 |
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[54a8a01] | 96 | mailfail ${USER} |
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| 97 | mailops ${USER} |
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[2fb99de] | 98 | makefile Makefile.gfortran |
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[b02a07e] | 99 | marsclass OD |
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| 100 | maxstep 11 |
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[d69b677] | 101 | number OFF |
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| 102 | omega 0 |
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| 103 | omegadiff 0 |
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[b02a07e] | 104 | oper 0 |
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[df87f0c] | 105 | outputdir /raid60/nas/tmc/Anne/Interpolation/Mergeflexextract/flexextract/run/workspace |
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[b02a07e] | 106 | prefix EN |
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[34b247b] | 107 | public 0 |
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[b02a07e] | 108 | purefc 0 |
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[34b247b] | 109 | queue ecgate |
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| 110 | request 2 |
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[b02a07e] | 111 | resol 1279 |
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| 112 | right 32.0 |
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| 113 | rrint 0 |
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[d69b677] | 114 | smooth 0 |
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[df87f0c] | 115 | start_date 20190215 |
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[b02a07e] | 116 | step 00 01 02 03 04 05 06 07 08 09 10 11 00 01 02 03 04 05 06 07 08 09 10 11 |
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[c97d8ec] | 117 | stream OPER |
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[b02a07e] | 118 | time 00 00 00 00 00 00 00 00 00 00 00 00 12 12 12 12 12 12 12 12 12 12 12 12 |
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| 119 | type AN FC FC FC FC FC FC FC FC FC FC FC AN FC FC FC FC FC FC FC FC FC FC FC |
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| 120 | upper 61.2 |
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[54a8a01] | 121 | wrf 0 |
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[b02a07e] | 122 | |
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[d69b677] | 123 | EOF |
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| 124 | |
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| 125 | |
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[34b247b] | 126 | submit.py --controlfile=${CONTROL} --inputdir=./work --outputdir=./work 1> prot 2>&1 |
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[d69b677] | 127 | |
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| 128 | if [ $? -eq 0 ] ; then |
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| 129 | l=0 |
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[34b247b] | 130 | for muser in `grep -i MAILOPS ${CONTROL}`; do |
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| 131 | if [ ${l} -gt 0 ] ; then |
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| 132 | mail -s flex.${HOST}.$$ ${muser} <prot |
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[d69b677] | 133 | fi |
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[34b247b] | 134 | l=$((${l}+1)) |
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[d69b677] | 135 | done |
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| 136 | else |
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| 137 | l=0 |
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[34b247b] | 138 | for muser in `grep -i MAILFAIL ${CONTROL}`; do |
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| 139 | if [ ${l} -gt 0 ] ; then |
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| 140 | mail -s "ERROR! flex.${HOST}.$$" ${muser} <prot |
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[d69b677] | 141 | fi |
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[34b247b] | 142 | l=$((${l}+1)) |
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[d69b677] | 143 | done |
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| 144 | fi |
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| 145 | |
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