1 | #!/usr/bin/env python |
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2 | # -*- coding: utf-8 -*- |
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3 | #******************************************************************************* |
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4 | # @Author: Leopold Haimberger (University of Vienna) |
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5 | # |
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6 | # @Date: November 2015 |
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7 | # |
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8 | # @Change History: |
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9 | # |
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10 | # February 2018 - Anne Philipp (University of Vienna): |
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11 | # - applied PEP8 style guide |
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12 | # - added documentation |
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13 | # - created function main and moved the two function calls for |
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14 | # arguments and plotting into it |
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15 | # - added function get_basics to extract the boundary conditions |
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16 | # of the data fields from the first grib file it gets. |
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17 | # |
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18 | # @License: |
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19 | # (C) Copyright 2015-2018. |
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20 | # |
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21 | # This software is licensed under the terms of the Apache Licence Version 2.0 |
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22 | # which can be obtained at http://www.apache.org/licenses/LICENSE-2.0. |
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23 | # |
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24 | # @Program Functionality: |
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25 | # Simple tool for creating maps and time series of retrieved fields. |
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26 | # |
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27 | # @Program Content: |
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28 | # - main |
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29 | # - get_basics |
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30 | # - get_files_per_date |
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31 | # - plot_retrieved |
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32 | # - plot_timeseries |
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33 | # - plot_map |
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34 | # - get_plot_args |
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35 | # |
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36 | #******************************************************************************* |
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37 | |
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38 | # ------------------------------------------------------------------------------ |
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39 | # MODULES |
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40 | # ------------------------------------------------------------------------------ |
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41 | import time |
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42 | import datetime |
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43 | import os |
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44 | import inspect |
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45 | import sys |
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46 | from argparse import ArgumentParser, ArgumentDefaultsHelpFormatter |
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47 | import matplotlib |
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48 | import matplotlib.pyplot as plt |
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49 | from mpl_toolkits.basemap import Basemap |
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50 | from eccodes import codes_grib_new_from_file, codes_get, codes_release, \ |
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51 | codes_get_values |
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52 | import numpy as np |
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53 | |
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54 | # software specific classes and modules from flex_extract |
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55 | from ControlFile import ControlFile |
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56 | from UioFiles import UioFiles |
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57 | |
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58 | # add path to pythonpath so that python finds its buddies |
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59 | LOCAL_PYTHON_PATH = os.path.dirname(os.path.abspath( |
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60 | inspect.getfile(inspect.currentframe()))) |
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61 | if LOCAL_PYTHON_PATH not in sys.path: |
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62 | sys.path.append(LOCAL_PYTHON_PATH) |
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63 | |
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64 | font = {'family': 'monospace', 'size': 12} |
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65 | matplotlib.rcParams['xtick.major.pad'] = '20' |
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66 | matplotlib.rc('font', **font) |
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67 | # ------------------------------------------------------------------------------ |
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68 | # FUNCTION |
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69 | # ------------------------------------------------------------------------------ |
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70 | def main(): |
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71 | ''' |
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72 | @Description: |
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73 | If plot_retrieved is called from command line, this function controls |
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74 | the program flow and calls the argumentparser function and |
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75 | the plot_retrieved function for plotting the retrieved GRIB data. |
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76 | |
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77 | @Input: |
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78 | <nothing> |
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79 | |
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80 | @Return: |
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81 | <nothing> |
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82 | ''' |
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83 | args, c = get_plot_args() |
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84 | plot_retrieved(c) |
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85 | |
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86 | return |
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87 | |
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88 | def get_basics(ifile, verb=False): |
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89 | """ |
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90 | @Description: |
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91 | An example grib file will be opened and basic information will |
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92 | be extracted. These information are important for later use and the |
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93 | initialization of numpy arrays for data storing. |
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94 | |
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95 | @Input: |
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96 | ifile: string |
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97 | Contains the full absolute path to the ECMWF grib file. |
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98 | |
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99 | verb (opt): bool |
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100 | Is True if there should be extra output in verbose mode. |
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101 | Default value is False. |
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102 | |
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103 | @Return: |
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104 | data: dict |
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105 | Contains basic informations of the ECMWF grib files, e.g. |
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106 | 'Ni', 'Nj', 'latitudeOfFirstGridPointInDegrees', |
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107 | 'longitudeOfFirstGridPointInDegrees', |
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108 | 'latitudeOfLastGridPointInDegrees', |
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109 | 'longitudeOfLastGridPointInDegrees', |
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110 | 'jDirectionIncrementInDegrees', |
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111 | 'iDirectionIncrementInDegrees' |
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112 | """ |
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113 | |
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114 | data = {} |
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115 | |
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116 | # --- open file --- |
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117 | print("Opening file for getting information data --- %s" % |
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118 | os.path.basename(ifile)) |
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119 | |
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120 | with open(ifile) as f: |
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121 | |
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122 | # load first message from file |
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123 | gid = codes_grib_new_from_file(f) |
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124 | |
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125 | # information needed from grib message |
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126 | keys = ['Ni', |
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127 | 'Nj', |
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128 | 'latitudeOfFirstGridPointInDegrees', |
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129 | 'longitudeOfFirstGridPointInDegrees', |
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130 | 'latitudeOfLastGridPointInDegrees', |
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131 | 'longitudeOfLastGridPointInDegrees', |
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132 | 'jDirectionIncrementInDegrees', |
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133 | 'iDirectionIncrementInDegrees'] |
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134 | |
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135 | if verb: |
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136 | print '\nInformations are: ' |
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137 | for key in keys: |
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138 | # Get the value of the key in a grib message. |
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139 | data[key] = codes_get(gid, key) |
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140 | if verb: |
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141 | print "%s = %s" % (key, data[key]) |
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142 | if verb: |
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143 | print '\n' |
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144 | |
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145 | # Free the memory for the message referred as gribid. |
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146 | codes_release(gid) |
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147 | |
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148 | return data |
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149 | |
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150 | def get_files_per_date(files, datelist): |
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151 | ''' |
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152 | @Description: |
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153 | The filenames contain dates which are used to select a list |
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154 | of files for a specific time period specified in datelist. |
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155 | |
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156 | @Input: |
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157 | files: instance of UioFiles |
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158 | For description see class documentation. |
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159 | It contains the attribute "files" which is a list of pathes |
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160 | to filenames. |
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161 | |
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162 | datelist: list of datetimes |
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163 | Contains the list of dates which should be processed for plotting. |
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164 | |
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165 | @Return: |
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166 | filelist: list of strings |
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167 | Contains the selected files for the time period. |
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168 | ''' |
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169 | |
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170 | filelist = [] |
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171 | for filename in files: |
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172 | filedate = filename[-8:] |
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173 | ddate = datetime.datetime.strptime(filedate, '%y%m%d%H') |
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174 | if ddate in datelist: |
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175 | filelist.append(filename) |
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176 | |
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177 | return filelist |
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178 | |
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179 | def plot_retrieved(c): |
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180 | ''' |
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181 | @Description: |
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182 | Reads GRIB data from a specified time period, a list of levels |
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183 | and a specified list of parameter. |
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184 | |
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185 | @Input: |
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186 | c: instance of class ControlFile |
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187 | Contains all necessary information of a CONTROL file. The parameters |
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188 | are: DAY1, DAY2, DTIME, MAXSTEP, TYPE, TIME, STEP, CLASS, STREAM, |
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189 | NUMBER, EXPVER, GRID, LEFT, LOWER, UPPER, RIGHT, LEVEL, LEVELIST, |
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190 | RESOL, GAUSS, ACCURACY, OMEGA, OMEGADIFF, ETA, ETADIFF, DPDETA, |
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191 | SMOOTH, FORMAT, ADDPAR, WRF, CWC, PREFIX, ECSTORAGE, ECTRANS, |
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192 | ECFSDIR, MAILOPS, MAILFAIL, GRIB2FLEXPART, DEBUG, INPUTDIR, |
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193 | OUTPUTDIR, FLEXPART_ROOT_SCRIPTS |
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194 | For more information about format and content of the parameter see |
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195 | documentation. |
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196 | |
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197 | @Return: |
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198 | <nothing> |
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199 | ''' |
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200 | start = datetime.datetime.strptime(c.start_date, '%Y%m%d%H') |
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201 | end = datetime.datetime.strptime(c.end_date, '%Y%m%d%H') |
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202 | |
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203 | # create datelist between start and end date |
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204 | datelist = [start] # initialise datelist with first date |
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205 | run_date = start |
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206 | while run_date < end: |
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207 | run_date += datetime.timedelta(hours=int(c.dtime)) |
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208 | datelist.append(run_date) |
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209 | |
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210 | print 'datelist: ', datelist |
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211 | |
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212 | c.paramIds = np.asarray(c.paramIds, dtype='int') |
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213 | c.levels = np.asarray(c.levels, dtype='int') |
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214 | c.area = np.asarray(c.area) |
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215 | |
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216 | files = UioFiles(c.inputdir, c.prefix+'*') |
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217 | ifiles = get_files_per_date(files.files, datelist) |
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218 | ifiles.sort() |
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219 | |
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220 | gdict = get_basics(ifiles[0], verb=False) |
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221 | |
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222 | fdict = dict() |
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223 | fmeta = dict() |
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224 | fstamp = dict() |
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225 | for p in c.paramIds: |
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226 | for l in c.levels: |
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227 | key = '{:0>3}_{:0>3}'.format(p, l) |
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228 | fdict[key] = [] |
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229 | fmeta[key] = [] |
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230 | fstamp[key] = [] |
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231 | |
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232 | for filename in ifiles: |
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233 | f = open(filename) |
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234 | print "Opening file for reading data --- %s" % filename |
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235 | fdate = datetime.datetime.strptime(filename[-8:], "%y%m%d%H") |
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236 | |
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237 | # Load in memory a grib message from a file. |
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238 | gid = codes_grib_new_from_file(f) |
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239 | while gid is not None: |
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240 | gtype = codes_get(gid, 'type') |
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241 | paramId = codes_get(gid, 'paramId') |
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242 | parameterName = codes_get(gid, 'parameterName') |
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243 | level = codes_get(gid, 'level') |
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244 | |
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245 | if paramId in c.paramIds and level in c.levels: |
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246 | key = '{:0>3}_{:0>3}'.format(paramId, level) |
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247 | print 'key: ', key |
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248 | if fstamp[key]: |
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249 | for i in range(len(fstamp[key])): |
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250 | if fdate < fstamp[key][i]: |
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251 | fstamp[key].insert(i, fdate) |
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252 | fmeta[key].insert(i, [paramId, parameterName, gtype, |
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253 | fdate, level]) |
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254 | fdict[key].insert(i, np.flipud(np.reshape( |
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255 | codes_get_values(gid), |
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256 | [gdict['Nj'], gdict['Ni']]))) |
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257 | break |
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258 | elif fdate > fstamp[key][i] and i == len(fstamp[key])-1: |
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259 | fstamp[key].append(fdate) |
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260 | fmeta[key].append([paramId, parameterName, gtype, |
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261 | fdate, level]) |
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262 | fdict[key].append(np.flipud(np.reshape( |
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263 | codes_get_values(gid), |
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264 | [gdict['Nj'], gdict['Ni']]))) |
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265 | break |
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266 | elif fdate > fstamp[key][i] and i != len(fstamp[key])-1 \ |
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267 | and fdate < fstamp[key][i+1]: |
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268 | fstamp[key].insert(i, fdate) |
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269 | fmeta[key].insert(i, [paramId, parameterName, gtype, |
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270 | fdate, level]) |
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271 | fdict[key].insert(i, np.flipud(np.reshape( |
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272 | codes_get_values(gid), |
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273 | [gdict['Nj'], gdict['Ni']]))) |
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274 | break |
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275 | else: |
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276 | pass |
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277 | else: |
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278 | fstamp[key].append(fdate) |
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279 | fmeta[key].append((paramId, parameterName, gtype, |
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280 | fdate, level)) |
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281 | fdict[key].append(np.flipud(np.reshape( |
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282 | codes_get_values(gid), [gdict['Nj'], gdict['Ni']]))) |
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283 | |
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284 | codes_release(gid) |
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285 | |
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286 | # Load in memory a grib message from a file. |
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287 | gid = codes_grib_new_from_file(f) |
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288 | |
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289 | f.close() |
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290 | |
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291 | for k in fdict.iterkeys(): |
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292 | print 'fmeta: ', len(fmeta), fmeta |
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293 | fml = fmeta[k] |
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294 | fdl = fdict[k] |
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295 | print 'fm1: ', len(fml), fml |
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296 | for fd, fm in zip(fdl, fml): |
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297 | print fm |
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298 | ftitle = fm[1] + ' {} '.format(fm[-1]) + \ |
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299 | datetime.datetime.strftime(fm[3], '%Y%m%d%H') |
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300 | pname = '_'.join(fm[1].split()) + '_{}_'.format(fm[-1]) + \ |
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301 | datetime.datetime.strftime(fm[3], '%Y%m%d%H') |
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302 | plot_map(c, fd, fm, gdict, ftitle, pname, 'png') |
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303 | |
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304 | for k in fdict.iterkeys(): |
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305 | fml = fmeta[k] |
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306 | fdl = fdict[k] |
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307 | fsl = fstamp[k] |
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308 | if fdl: |
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309 | fm = fml[0] |
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310 | fd = fdl[0] |
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311 | ftitle = fm[1] + ' {} '.format(fm[-1]) + \ |
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312 | datetime.datetime.strftime(fm[3], '%Y%m%d%H') |
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313 | pname = '_'.join(fm[1].split()) + '_{}_'.format(fm[-1]) + \ |
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314 | datetime.datetime.strftime(fm[3], '%Y%m%d%H') |
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315 | lat = -20. |
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316 | lon = 20. |
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317 | plot_timeseries(c, fdl, fml, fsl, lat, lon, gdict, |
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318 | ftitle, pname, 'png') |
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319 | |
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320 | return |
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321 | |
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322 | def plot_timeseries(c, flist, fmetalist, ftimestamps, lat, lon, |
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323 | gdict, ftitle, filename, fending, show=False): |
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324 | ''' |
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325 | @Description: |
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326 | Creates a timeseries plot for a given lat/lon position. |
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327 | |
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328 | @Input: |
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329 | c: instance of class ControlFile |
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330 | Contains all necessary information of a CONTROL file. The parameters |
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331 | are: DAY1, DAY2, DTIME, MAXSTEP, TYPE, TIME, STEP, CLASS, STREAM, |
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332 | NUMBER, EXPVER, GRID, LEFT, LOWER, UPPER, RIGHT, LEVEL, LEVELIST, |
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333 | RESOL, GAUSS, ACCURACY, OMEGA, OMEGADIFF, ETA, ETADIFF, DPDETA, |
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334 | SMOOTH, FORMAT, ADDPAR, WRF, CWC, PREFIX, ECSTORAGE, ECTRANS, |
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335 | ECFSDIR, MAILOPS, MAILFAIL, GRIB2FLEXPART, DEBUG, INPUTDIR, |
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336 | OUTPUTDIR, FLEXPART_ROOT_SCRIPTS |
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337 | For more information about format and content of the parameter see |
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338 | documentation. |
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339 | |
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340 | flist: numpy array, 2d |
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341 | The actual data values to be plotted from the grib messages. |
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342 | |
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343 | fmetalist: list of strings |
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344 | Contains some meta date for the data field to be plotted: |
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345 | parameter id, parameter Name, grid type, datetime, level |
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346 | |
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347 | ftimestamps: list of datetime |
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348 | Contains the time stamps. |
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349 | |
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350 | lat: float |
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351 | The latitude for which the timeseries should be plotted. |
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352 | |
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353 | lon: float |
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354 | The longitude for which the timeseries should be plotted. |
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355 | |
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356 | gdict: dict |
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357 | Contains basic informations of the ECMWF grib files, e.g. |
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358 | 'Ni', 'Nj', 'latitudeOfFirstGridPointInDegrees', |
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359 | 'longitudeOfFirstGridPointInDegrees', |
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360 | 'latitudeOfLastGridPointInDegrees', |
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361 | 'longitudeOfLastGridPointInDegrees', |
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362 | 'jDirectionIncrementInDegrees', |
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363 | 'iDirectionIncrementInDegrees' |
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364 | |
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365 | ftitle: string |
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366 | The title of the timeseries. |
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367 | |
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368 | filename: string |
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369 | The time series is stored in a file with this name. |
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370 | |
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371 | fending: string |
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372 | Contains the type of plot, e.g. pdf or png |
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373 | |
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374 | show: boolean |
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375 | Decides if the plot is shown after plotting or hidden. |
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376 | |
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377 | @Return: |
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378 | <nothing> |
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379 | ''' |
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380 | print 'plotting timeseries' |
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381 | |
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382 | t1 = time.time() |
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383 | |
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384 | #llx = gdict['longitudeOfFirstGridPointInDegrees'] |
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385 | #if llx > 180. : |
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386 | # llx -= 360. |
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387 | #lly = gdict['latitudeOfLastGridPointInDegrees'] |
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388 | #dxout = gdict['iDirectionIncrementInDegrees'] |
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389 | #dyout = gdict['jDirectionIncrementInDegrees'] |
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390 | #urx = gdict['longitudeOfLastGridPointInDegrees'] |
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391 | #ury = gdict['latitudeOfFirstGridPointInDegrees'] |
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392 | #numxgrid = gdict['Ni'] |
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393 | #numygrid = gdict['Nj'] |
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394 | |
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395 | farr = np.asarray(flist) |
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396 | #(time, lat, lon) |
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397 | |
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398 | #lonindex = linspace(llx, urx, numxgrid) |
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399 | #latindex = linspace(lly, ury, numygrid) |
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400 | |
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401 | ts = farr[:, 0, 0] |
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402 | |
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403 | fig = plt.figure(figsize=(12, 6.7)) |
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404 | |
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405 | plt.plot(ftimestamps, ts) |
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406 | plt.title(ftitle) |
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407 | |
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408 | plt.savefig(c.outputdir + '/' + filename + '_TS.' + fending, |
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409 | facecolor=fig.get_facecolor(), |
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410 | edgecolor='none', |
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411 | format=fending) |
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412 | print 'created ', c.outputdir + '/' + filename |
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413 | if show: |
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414 | plt.show() |
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415 | fig.clf() |
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416 | plt.close(fig) |
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417 | |
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418 | print time.time() - t1, 's' |
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419 | |
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420 | return |
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421 | |
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422 | def plot_map(c, flist, fmetalist, gdict, ftitle, filename, fending, show=False): |
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423 | ''' |
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424 | @Description: |
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425 | Creates a basemap plot with imshow for a given data field. |
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426 | |
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427 | @Input: |
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428 | c: instance of class ControlFile |
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429 | Contains all necessary information of a CONTROL file. The parameters |
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430 | are: DAY1, DAY2, DTIME, MAXSTEP, TYPE, TIME, STEP, CLASS, STREAM, |
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431 | NUMBER, EXPVER, GRID, LEFT, LOWER, UPPER, RIGHT, LEVEL, LEVELIST, |
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432 | RESOL, GAUSS, ACCURACY, OMEGA, OMEGADIFF, ETA, ETADIFF, DPDETA, |
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433 | SMOOTH, FORMAT, ADDPAR, WRF, CWC, PREFIX, ECSTORAGE, ECTRANS, |
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434 | ECFSDIR, MAILOPS, MAILFAIL, GRIB2FLEXPART, DEBUG, INPUTDIR, |
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435 | OUTPUTDIR, FLEXPART_ROOT_SCRIPTS |
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436 | For more information about format and content of the parameter see |
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437 | documentation. |
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438 | |
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439 | flist: numpy array, 2d |
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440 | The actual data values to be plotted from the grib messages. |
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441 | |
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442 | fmetalist: list of strings |
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443 | Contains some meta date for the data field to be plotted: |
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444 | parameter id, parameter Name, grid type, datetime, level |
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445 | |
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446 | gdict: dict |
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447 | Contains basic informations of the ECMWF grib files, e.g. |
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448 | 'Ni', 'Nj', 'latitudeOfFirstGridPointInDegrees', |
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449 | 'longitudeOfFirstGridPointInDegrees', |
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450 | 'latitudeOfLastGridPointInDegrees', |
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451 | 'longitudeOfLastGridPointInDegrees', |
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452 | 'jDirectionIncrementInDegrees', |
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453 | 'iDirectionIncrementInDegrees' |
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454 | |
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455 | ftitle: string |
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456 | The titel of the plot. |
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457 | |
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458 | filename: string |
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459 | The plot is stored in a file with this name. |
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460 | |
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461 | fending: string |
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462 | Contains the type of plot, e.g. pdf or png |
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463 | |
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464 | show: boolean |
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465 | Decides if the plot is shown after plotting or hidden. |
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466 | |
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467 | @Return: |
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468 | <nothing> |
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469 | ''' |
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470 | print 'plotting map' |
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471 | |
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472 | t1 = time.time() |
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473 | |
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474 | fig = plt.figure(figsize=(12, 6.7)) |
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475 | #mbaxes = fig.add_axes([0.05, 0.15, 0.8, 0.7]) |
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476 | |
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477 | llx = gdict['longitudeOfFirstGridPointInDegrees'] #- 360 |
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478 | if llx > 180.: |
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479 | llx -= 360. |
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480 | lly = gdict['latitudeOfLastGridPointInDegrees'] |
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481 | #dxout = gdict['iDirectionIncrementInDegrees'] |
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482 | #dyout = gdict['jDirectionIncrementInDegrees'] |
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483 | urx = gdict['longitudeOfLastGridPointInDegrees'] |
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484 | ury = gdict['latitudeOfFirstGridPointInDegrees'] |
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485 | #numxgrid = gdict['Ni'] |
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486 | #numygrid = gdict['Nj'] |
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487 | |
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488 | m = Basemap(projection='cyl', llcrnrlon=llx, llcrnrlat=lly, |
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489 | urcrnrlon=urx, urcrnrlat=ury, resolution='i') |
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490 | |
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491 | #lw = 0.5 |
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492 | m.drawmapboundary() |
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493 | #x = linspace(llx, urx, numxgrid) |
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494 | #y = linspace(lly, ury, numygrid) |
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495 | |
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496 | #xx, yy = m(*meshgrid(x, y)) |
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497 | |
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498 | #s = m.contourf(xx, yy, flist) |
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499 | |
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500 | s = plt.imshow(flist.T, |
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501 | extent=(llx, urx, lly, ury), |
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502 | alpha=1.0, |
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503 | interpolation='nearest' |
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504 | #vmin=vn, |
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505 | #vmax=vx, |
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506 | #cmap=my_cmap, |
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507 | #levels=levels, |
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508 | #cmap=my_cmap, |
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509 | #norm=LogNorm(vn,vx) |
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510 | ) |
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511 | |
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512 | plt.title(ftitle, y=1.08) |
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513 | cb = m.colorbar(s, location="right", pad="10%") |
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514 | cb.set_label('label', size=14) |
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515 | |
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516 | thickline = np.arange(lly, ury+1, 10.) |
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517 | thinline = np.arange(lly, ury+1, 5.) |
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518 | m.drawparallels(thickline, |
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519 | color='gray', |
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520 | dashes=[1, 1], |
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521 | linewidth=0.5, |
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522 | labels=[1, 1, 1, 1], |
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523 | xoffset=1.) |
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524 | m.drawparallels(np.setdiff1d(thinline, thickline), |
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525 | color='lightgray', |
---|
526 | dashes=[1, 1], |
---|
527 | linewidth=0.5, |
---|
528 | labels=[0, 0, 0, 0]) |
---|
529 | |
---|
530 | thickline = np.arange(llx, urx+1, 10.) |
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531 | thinline = np.arange(llx, urx+1, 5.) |
---|
532 | m.drawmeridians(thickline, |
---|
533 | color='gray', |
---|
534 | dashes=[1, 1], |
---|
535 | linewidth=0.5, |
---|
536 | labels=[1, 1, 1, 1], |
---|
537 | yoffset=1.) |
---|
538 | m.drawmeridians(np.setdiff1d(thinline, thickline), |
---|
539 | color='lightgray', |
---|
540 | dashes=[1, 1], |
---|
541 | linewidth=0.5, |
---|
542 | labels=[0, 0, 0, 0]) |
---|
543 | |
---|
544 | m.drawcoastlines() |
---|
545 | m.drawcountries() |
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546 | |
---|
547 | plt.savefig(c.outputdir + '/' + filename + '_MAP.' + fending, |
---|
548 | facecolor=fig.get_facecolor(), |
---|
549 | edgecolor='none', |
---|
550 | format=fending) |
---|
551 | print 'created ', c.outputdir + '/' + filename |
---|
552 | if show: |
---|
553 | plt.show() |
---|
554 | fig.clf() |
---|
555 | plt.close(fig) |
---|
556 | |
---|
557 | print time.time() - t1, 's' |
---|
558 | |
---|
559 | return |
---|
560 | |
---|
561 | def get_plot_args(): |
---|
562 | ''' |
---|
563 | @Description: |
---|
564 | Assigns the command line arguments and reads CONTROL file |
---|
565 | content. Apply default values for non mentioned arguments. |
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566 | |
---|
567 | @Input: |
---|
568 | <nothing> |
---|
569 | |
---|
570 | @Return: |
---|
571 | args: instance of ArgumentParser |
---|
572 | Contains the commandline arguments from script/program call. |
---|
573 | |
---|
574 | c: instance of class ControlFile |
---|
575 | Contains all necessary information of a CONTROL file. The parameters |
---|
576 | are: DAY1, DAY2, DTIME, MAXSTEP, TYPE, TIME, STEP, CLASS, STREAM, |
---|
577 | NUMBER, EXPVER, GRID, LEFT, LOWER, UPPER, RIGHT, LEVEL, LEVELIST, |
---|
578 | RESOL, GAUSS, ACCURACY, OMEGA, OMEGADIFF, ETA, ETADIFF, DPDETA, |
---|
579 | SMOOTH, FORMAT, ADDPAR, WRF, CWC, PREFIX, ECSTORAGE, ECTRANS, |
---|
580 | ECFSDIR, MAILOPS, MAILFAIL, GRIB2FLEXPART, DEBUG, INPUTDIR, |
---|
581 | OUTPUTDIR, FLEXPART_ROOT_SCRIPTS |
---|
582 | For more information about format and content of the parameter see |
---|
583 | documentation. |
---|
584 | ''' |
---|
585 | parser = ArgumentParser(description='Plot retrieved GRIB data from ' + \ |
---|
586 | 'ECMWF MARS archive', |
---|
587 | formatter_class=ArgumentDefaultsHelpFormatter) |
---|
588 | |
---|
589 | # the most important arguments |
---|
590 | parser.add_argument("--start_date", dest="start_date", |
---|
591 | help="start date YYYYMMDD") |
---|
592 | parser.add_argument("--end_date", dest="end_date", |
---|
593 | help="end_date YYYYMMDD") |
---|
594 | |
---|
595 | parser.add_argument("--start_step", dest="start_step", |
---|
596 | help="start step in hours") |
---|
597 | parser.add_argument("--end_step", dest="end_step", |
---|
598 | help="end step in hours") |
---|
599 | |
---|
600 | # some arguments that override the default in the CONTROL file |
---|
601 | parser.add_argument("--levelist", dest="levelist", |
---|
602 | help="vertical levels to be retrieved, e.g. 30/to/60") |
---|
603 | parser.add_argument("--area", dest="area", |
---|
604 | help="area defined as north/west/south/east") |
---|
605 | parser.add_argument("--paramIds", dest="paramIds", |
---|
606 | help="parameter IDs") |
---|
607 | parser.add_argument("--prefix", dest="prefix", default='EN', |
---|
608 | help="output file name prefix") |
---|
609 | |
---|
610 | # set the working directories |
---|
611 | parser.add_argument("--inputdir", dest="inputdir", default=None, |
---|
612 | help="root directory for storing intermediate files") |
---|
613 | parser.add_argument("--outputdir", dest="outputdir", default=None, |
---|
614 | help="root directory for storing output files") |
---|
615 | parser.add_argument("--flexpart_root_scripts", dest="flexpart_root_scripts", |
---|
616 | help="FLEXPART root directory (to find \ |
---|
617 | 'grib2flexpart and COMMAND file)\n \ |
---|
618 | Normally flex_extract resides in the scripts directory \ |
---|
619 | of the FLEXPART distribution") |
---|
620 | |
---|
621 | parser.add_argument("--controlfile", dest="controlfile", |
---|
622 | default='CONTROL.temp', |
---|
623 | help="file with CONTROL parameters") |
---|
624 | args = parser.parse_args() |
---|
625 | |
---|
626 | try: |
---|
627 | c = ControlFile(args.controlfile) |
---|
628 | except IOError: |
---|
629 | try: |
---|
630 | c = ControlFile(LOCAL_PYTHON_PATH + args.controlfile) |
---|
631 | except IOError: |
---|
632 | print 'Could not read CONTROL file "' + args.controlfile + '"' |
---|
633 | print 'Either it does not exist or its syntax is wrong.' |
---|
634 | print 'Try "' + sys.argv[0].split('/')[-1] + \ |
---|
635 | ' -h" to print usage information' |
---|
636 | exit(1) |
---|
637 | |
---|
638 | if args.levelist: |
---|
639 | c.levels = args.levelist.split('/') |
---|
640 | else: |
---|
641 | c.levels = [0] |
---|
642 | |
---|
643 | if args.area: |
---|
644 | c.area = args.area.split('/') |
---|
645 | else: |
---|
646 | c.area = '[0,0]' |
---|
647 | |
---|
648 | c.paramIds = args.paramIds.split('/') |
---|
649 | |
---|
650 | if args.start_step: |
---|
651 | c.start_step = int(args.start_step) |
---|
652 | else: |
---|
653 | c.start_step = 0 |
---|
654 | |
---|
655 | if args.end_step: |
---|
656 | c.end_step = int(args.end_step) |
---|
657 | else: |
---|
658 | c.end_step = 0 |
---|
659 | |
---|
660 | c.start_date = args.start_date |
---|
661 | c.end_date = args.end_date |
---|
662 | |
---|
663 | c.prefix = args.prefix |
---|
664 | |
---|
665 | c.inputdir = args.inputdir |
---|
666 | |
---|
667 | if args.outputdir: |
---|
668 | c.outputdir = args.outputdir |
---|
669 | else: |
---|
670 | c.outputdir = c.inputdir |
---|
671 | |
---|
672 | return args, c |
---|
673 | |
---|
674 | if __name__ == "__main__": |
---|
675 | main() |
---|