[d69b677] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | # ON ECGB: |
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| 4 | # start with ecaccess-job-submit -queueName ecgb NAME_OF_THIS_FILE on gateway server |
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| 5 | # start with sbatch NAME_OF_THIS_FILE directly on machine |
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| 6 | |
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| 7 | #SBATCH --workdir=/scratch/ms/spatlh00/lh0 |
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| 8 | #SBATCH --qos=normal |
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| 9 | #SBATCH --job-name=flex_ecmwf |
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| 10 | #SBATCH --output=flex_ecmwf.%j.out |
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| 11 | #SBATCH --error=flex_ecmwf.%j.out |
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| 12 | #SBATCH --mail-type=FAIL |
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| 13 | #SBATCH --time=12:00:00 |
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| 14 | |
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| 15 | ## CRAY specific batch requests |
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| 16 | ##PBS -N flex_ecmwf |
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| 17 | ##PBS -q np |
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| 18 | ##PBS -S /usr/bin/ksh |
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| 19 | ## -o /scratch/ms/spatlh00/lh0/flex_ecmwf.$PBS_JOBID.out |
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| 20 | ## job output is in .ecaccess_DO_NOT_REMOVE |
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| 21 | ##PBS -j oe |
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| 22 | ##PBS -V |
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| 23 | ##PBS -l EC_threads_per_task=24 |
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| 24 | ##PBS -l EC_memory_per_task=32000MB |
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| 25 | |
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| 26 | set -x |
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| 27 | |
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| 28 | case $HOST in |
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| 29 | *ecg*) |
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| 30 | module load python |
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| 31 | module unload grib_api |
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| 32 | module unload emos |
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| 33 | module load grib_api/1.14.5 |
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| 34 | module load emos/437-r64 |
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| 35 | # export ECMWFDATA=$HOME/ECMWFDATA7.0 |
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| 36 | # export PYTHONPATH=$ECMWFDATA/python |
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| 37 | export PATH=${PATH}:${HOME}/ECMWFDATA7.0/python |
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| 38 | ;; |
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| 39 | *cca*) |
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| 40 | module switch PrgEnv-cray PrgEnv-intel |
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| 41 | module load grib_api |
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| 42 | module load emos |
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| 43 | module load python |
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| 44 | export SCRATCH=$TMPDIR |
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| 45 | # export ECMWFDATA=$HOME/ECMWFDATA7.0 |
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| 46 | # export PYTHONPATH=$ECMWFDATA/python |
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| 47 | export PATH=${PATH}:${HOME}/ECMWFDATA7.0/python |
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| 48 | ;; |
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| 49 | # *) |
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| 50 | # export ECMWFDATA=$HOME/ECMWFDATA7.0 |
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| 51 | # export PATH=/opt/anaconda/bin:$ECMWFDATA/python:${PATH} |
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| 52 | # export PYTHONPATH=/opt/anaconda/lib/python2.7/site-packages/grib_api:$ECMWFDATA/python |
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| 53 | # export SCRATCH=$ECMWFDATA/python |
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| 54 | # which python |
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| 55 | # ;; |
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| 56 | esac |
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| 57 | |
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| 58 | cd $SCRATCH |
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| 59 | mkdir -p python$$ |
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| 60 | cd python$$ |
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| 61 | |
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| 62 | export CONTROL=CONTROL |
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| 63 | |
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| 64 | cat >$CONTROL<<EOF |
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| 65 | GATEWAY srvx7.img.univie.ac.at |
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| 66 | DESTINATION leo@genericSftp |
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| 67 | EOF |
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| 68 | cat >>$CONTROL<<EOF |
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| 69 | EOF |
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| 70 | |
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| 71 | |
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| 72 | submit.py --controlfile=$CONTROL --inputdir=./work --outputdir=./work >prot |
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| 73 | |
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| 74 | if [ $? -eq 0 ] ; then |
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| 75 | l=0 |
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| 76 | for muser in `grep -i MAILOPS $CONTROL`; do |
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| 77 | if [ $l -gt 0 ] ; then |
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| 78 | mail -s flex.${HOST}.$$ $muser <prot |
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| 79 | fi |
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| 80 | l=$(($l+1)) |
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| 81 | done |
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| 82 | else |
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| 83 | l=0 |
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| 84 | for muser in `grep -i MAILFAIL $CONTROL`; do |
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| 85 | if [ $l -gt 0 ] ; then |
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| 86 | mail -s "ERROR! flex.${HOST}.$$" $muser <prot |
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| 87 | fi |
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| 88 | l=$(($l+1)) |
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| 89 | done |
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| 90 | fi |
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| 91 | |
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