[b38d750] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | # ON ECGB: |
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| 4 | # start with ecaccess-job-submit -queueName ecgb NAME_OF_THIS_FILE on gateway server |
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| 5 | # start with sbatch NAME_OF_THIS_FILE directly on machine |
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| 6 | |
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| 7 | #SBATCH --workdir=/scratch/ms/spatlh00/lh0 |
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| 8 | #SBATCH --qos=normal |
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| 9 | #SBATCH --job-name=flex_ecmwf |
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| 10 | #SBATCH --output=flex_ecmwf.%j.out |
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| 11 | #SBATCH --error=flex_ecmwf.%j.out |
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| 12 | #SBATCH --mail-type=FAIL |
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| 13 | #SBATCH --time=12:00:00 |
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| 14 | |
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| 15 | ## CRAY specific batch requests |
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| 16 | ##PBS -N flex_ecmwf |
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| 17 | ##PBS -q ns |
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| 18 | ##PBS -S /usr/bin/ksh |
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| 19 | # -o /scratch/ms/no/sbc/flex_ecmwf.$Jobname.$Job_ID.out |
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| 20 | # job output is in .ecaccess_DO_NOT_REMOVE |
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| 21 | ##PBS -j oe |
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| 22 | ##PBS -V |
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| 23 | ##PBS -l EC_threads_per_task=1 |
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| 24 | ##PBS -l EC_memory_per_task=3200MB |
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| 25 | |
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| 26 | set -x |
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[fb8810c] | 27 | export VERSION=7.0.4 |
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[b38d750] | 28 | case $HOST in |
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| 29 | *ecg*) |
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| 30 | module load python |
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| 31 | module unload grib_api |
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| 32 | module unload emos |
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| 33 | module load grib_api/1.14.5 |
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| 34 | module load emos/437-r64 |
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| 35 | export FLEXPART_ROOT_SCRIPTS= |
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| 36 | export MAKEFILE=Makefile.gfortran |
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| 37 | ;; |
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| 38 | *cca*) |
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| 39 | module switch PrgEnv-cray PrgEnv-intel |
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| 40 | module load grib_api |
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| 41 | module load emos |
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| 42 | module load python |
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| 43 | echo ${GROUP} |
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| 44 | echo ${HOME} |
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| 45 | echo $HOME | awk -F / '{print $1, $2, $3, $4}' |
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| 46 | export GROUP=`echo $HOME | awk -F / '{print $4}'` |
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| 47 | export SCRATCH=/scratch/ms/${GROUP}/${USER} |
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| 48 | export FLEXPART_ROOT_SCRIPTS= |
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| 49 | export MAKEFILE=Makefile.CRAY |
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| 50 | ;; |
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| 51 | esac |
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| 52 | |
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| 53 | mkdir -p $FLEXPART_ROOT_SCRIPTS/flex_extract_v$VERSION |
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| 54 | cd $FLEXPART_ROOT_SCRIPTS/flex_extract_v$VERSION # if FLEXPART_ROOT is not set this means cd to the home directory |
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| 55 | tar -xvf $HOME/flex_extract_v$VERSION.tar |
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| 56 | cd src |
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| 57 | \rm *.o *.mod CONVERT2 |
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| 58 | make -f $MAKEFILE >flexcompile 2>flexcompile |
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| 59 | |
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| 60 | ls -l CONVERT2 >>flexcompile |
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| 61 | if [ $? -eq 0 ]; then |
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| 62 | echo 'SUCCESS!' >>flexcompile |
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| 63 | mail -s flexcompile.$HOST.$$ $USER <flexcompile |
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| 64 | else |
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| 65 | echo Environment: >>flexcompile |
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| 66 | env >> flexcompile |
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| 67 | mail -s "ERROR! flexcompile.$HOST.$$" $USER <flexcompile |
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| 68 | fi |
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