1 | #!/bin/bash |
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2 | # |
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3 | # @Author: Anne Philipp |
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4 | # |
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5 | # @Date: October, 4 2018 |
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6 | # |
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7 | # @Description: |
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8 | # This script defines the available command-line parameters |
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9 | # for running flex_extract and combines them for the execution |
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10 | # of the Python program. It also does some checks to |
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11 | # guarantee necessary parameters were set and consistent. |
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12 | # |
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13 | # @Licence: |
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14 | # (C) Copyright 2014-2019. |
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15 | # |
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16 | # SPDX-License-Identifier: CC-BY-4.0 |
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17 | # |
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18 | # This work is licensed under the Creative Commons Attribution 4.0 |
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19 | # International License. To view a copy of this license, visit |
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20 | # http://creativecommons.org/licenses/by/4.0/ or send a letter to |
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21 | # Creative Commons, PO Box 1866, Mountain View, CA 94042, USA. |
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22 | # |
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23 | # ----------------------------------------------------------------- |
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24 | # AVAILABLE COMMANDLINE ARGUMENTS TO SET |
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25 | # |
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26 | # THE USER HAS TO SPECIFY THESE PARAMETERS: |
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27 | |
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28 | QUEUE='ecgate' |
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29 | START_DATE=None |
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30 | END_DATE=None |
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31 | DATE_CHUNK=None |
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32 | JOB_CHUNK=3 |
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33 | BASETIME=None |
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34 | STEP=None |
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35 | LEVELIST=None |
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36 | AREA=None |
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37 | INPUTDIR=None |
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38 | OUTPUTDIR=None |
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39 | PP_ID=None |
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40 | JOB_TEMPLATE='job.temp' |
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41 | CONTROLFILE='CONTROL_EA5' |
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42 | DEBUG=0 |
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43 | REQUEST=2 |
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44 | PUBLIC=0 |
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45 | |
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46 | # ----------------------------------------------------------------- |
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47 | # |
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48 | # AFTER THIS LINE THE USER DOES NOT HAVE TO CHANGE ANYTHING !!! |
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49 | # |
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50 | # ----------------------------------------------------------------- |
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51 | |
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52 | # PATH TO SUBMISSION SCRIPT |
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53 | pyscript=../Source/Python/submit.py |
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54 | |
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55 | # INITIALIZE EMPTY PARAMETERLIST |
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56 | parameterlist="" |
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57 | |
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58 | # CHECK FOR MORE PARAMETER |
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59 | if [ -n "$START_DATE" ]; then |
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60 | parameterlist+=" --start_date=$START_DATE" |
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61 | fi |
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62 | if [ -n "$END_DATE" ]; then |
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63 | parameterlist+=" --end_date=$END_DATE" |
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64 | fi |
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65 | if [ -n "$DATE_CHUNK" ]; then |
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66 | parameterlist+=" --date_chunk=$DATE_CHUNK" |
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67 | fi |
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68 | if [ -n "$JOB_CHUNK" ]; then |
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69 | parameterlist+=" --job_chunk=$JOB_CHUNK" |
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70 | fi |
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71 | if [ -n "$BASETIME" ]; then |
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72 | parameterlist+=" --basetime=$BASETIME" |
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73 | fi |
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74 | if [ -n "$STEP" ]; then |
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75 | parameterlist+=" --step=$STEP" |
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76 | fi |
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77 | if [ -n "$LEVELIST" ]; then |
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78 | parameterlist+=" --levelist=$LEVELIST" |
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79 | fi |
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80 | if [ -n "$AREA" ]; then |
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81 | parameterlist+=" --area=$AREA" |
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82 | fi |
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83 | if [ -n "$INPUTDIR" ]; then |
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84 | parameterlist+=" --inputdir=$INPUTDIR" |
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85 | fi |
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86 | if [ -n "$OUTPUTDIR" ]; then |
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87 | parameterlist+=" --outputdir=$OUTPUTDIR" |
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88 | fi |
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89 | if [ -n "$PP_ID" ]; then |
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90 | parameterlist+=" --ppid=$PP_ID" |
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91 | fi |
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92 | if [ -n "$JOB_TEMPLATE" ]; then |
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93 | parameterlist+=" --job_template=$JOB_TEMPLATE" |
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94 | fi |
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95 | if [ -n "$QUEUE" ]; then |
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96 | parameterlist+=" --queue=$QUEUE" |
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97 | fi |
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98 | if [ -n "$CONTROLFILE" ]; then |
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99 | parameterlist+=" --controlfile=$CONTROLFILE" |
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100 | fi |
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101 | if [ -n "$DEBUG" ]; then |
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102 | parameterlist+=" --debug=$DEBUG" |
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103 | fi |
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104 | if [ -n "$REQUEST" ]; then |
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105 | parameterlist+=" --request=$REQUEST" |
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106 | fi |
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107 | if [ -n "$PUBLIC" ]; then |
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108 | parameterlist+=" --public=$PUBLIC" |
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109 | fi |
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110 | |
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111 | # ----------------------------------------------------------------- |
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112 | # CALL SCRIPT WITH DETERMINED COMMANDLINE ARGUMENTS |
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113 | |
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114 | $pyscript $parameterlist |
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115 | |
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