Ignore:
Timestamp:
Mar 8, 2019, 10:00:34 AM (5 years ago)
Author:
Anne Philipp <anne.philipp@…>
Branches:
master, ctbto, dev
Children:
b4a4777
Parents:
8778c5a
Message:

deleted jobscripts for tracking and updated Sphinx doc

File:
1 edited

Legend:

Unmodified
Added
Removed

  • documentation/Sphinx/build/html/_modules/prepare_flexpart.html

    r2625ca8 rf66f990  
    227227<span class="kn">from</span> <span class="nn">classes.UioFiles</span> <span class="k">import</span> <span class="n">UioFiles</span>
    228228<span class="kn">from</span> <span class="nn">classes.ControlFile</span> <span class="k">import</span> <span class="n">ControlFile</span>
    229 <span class="kn">from</span> <span class="nn">tools</span> <span class="k">import</span> <span class="n">clean_up</span><span class="p">,</span> <span class="n">get_cmdline_args</span><span class="p">,</span> <span class="n">read_ecenv</span><span class="p">,</span> <span class="n">make_dir</span>
     229<span class="kn">from</span> <span class="nn">tools</span> <span class="k">import</span> <span class="p">(</span><span class="n">setup_controldata</span><span class="p">,</span> <span class="n">clean_up</span><span class="p">,</span> <span class="n">get_cmdline_args</span><span class="p">,</span>
     230                   <span class="n">read_ecenv</span><span class="p">,</span> <span class="n">make_dir</span><span class="p">)</span>
    230231<span class="kn">from</span> <span class="nn">classes.EcFlexpart</span> <span class="k">import</span> <span class="n">EcFlexpart</span>
    231 
    232 <span class="n">ecapi</span> <span class="o">=</span> <span class="s1">&#39;ecmwf&#39;</span> <span class="ow">not</span> <span class="ow">in</span> <span class="n">socket</span><span class="o">.</span><span class="n">gethostname</span><span class="p">()</span>
    233 <span class="k">try</span><span class="p">:</span>
    234     <span class="k">if</span> <span class="n">ecapi</span><span class="p">:</span>
    235         <span class="kn">import</span> <span class="nn">ecmwfapi</span>
    236 <span class="k">except</span> <span class="ne">ImportError</span><span class="p">:</span>
    237     <span class="n">ecapi</span> <span class="o">=</span> <span class="kc">False</span>
    238232
    239233<span class="c1"># ------------------------------------------------------------------------------</span>
    … …  
    254248<span class="sd">    &#39;&#39;&#39;</span>
    255249
    256     <span class="n">args</span> <span class="o">=</span> <span class="n">get_cmdline_args</span><span class="p">()</span>
    257     <span class="n">c</span> <span class="o">=</span> <span class="n">ControlFile</span><span class="p">(</span><span class="n">args</span><span class="o">.</span><span class="n">controlfile</span><span class="p">)</span>
    258 
    259     <span class="n">env_parameter</span> <span class="o">=</span> <span class="n">read_ecenv</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_ECMWF_ENV</span><span class="p">)</span>
    260     <span class="n">c</span><span class="o">.</span><span class="n">assign_args_to_control</span><span class="p">(</span><span class="n">args</span><span class="p">)</span>
    261     <span class="n">c</span><span class="o">.</span><span class="n">assign_envs_to_control</span><span class="p">(</span><span class="n">env_parameter</span><span class="p">)</span>
    262     <span class="n">c</span><span class="o">.</span><span class="n">check_conditions</span><span class="p">(</span><span class="n">args</span><span class="o">.</span><span class="n">queue</span><span class="p">)</span>
    263 
    264     <span class="n">prepare_flexpart</span><span class="p">(</span><span class="n">args</span><span class="o">.</span><span class="n">ppid</span><span class="p">,</span> <span class="n">c</span><span class="p">)</span>
     250    <span class="n">c</span><span class="p">,</span> <span class="n">ppid</span><span class="p">,</span> <span class="n">_</span><span class="p">,</span> <span class="n">_</span> <span class="o">=</span> <span class="n">setup_controldata</span><span class="p">()</span>
     251    <span class="n">prepare_flexpart</span><span class="p">(</span><span class="n">ppid</span><span class="p">,</span> <span class="n">c</span><span class="p">)</span>
     252    <span class="n">normal_exit</span><span class="p">(</span><span class="s1">&#39;Preparing FLEXPART output files: Done!&#39;</span><span class="p">)</span>
    265253
    266254    <span class="k">return</span></div>
    … …  
    290278    <span class="n">check_ppid</span><span class="p">(</span><span class="n">c</span><span class="p">,</span> <span class="n">ppid</span><span class="p">)</span>
    291279
    292     <span class="n">c</span><span class="o">.</span><span class="n">ecapi</span> <span class="o">=</span> <span class="n">ecapi</span>
    293 
    294280    <span class="c1"># create the start and end date</span>
    295281    <span class="n">start</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">date</span><span class="p">(</span><span class="n">year</span><span class="o">=</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">start_date</span><span class="p">[:</span><span class="mi">4</span><span class="p">]),</span>
    … …  
    305291    <span class="c1"># since we need the 12 hours upfront</span>
    306292    <span class="c1"># (the day before from 12 UTC to current day 00 UTC)</span>
    307     <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">basetime</span> <span class="o">==</span> <span class="s1">&#39;00&#39;</span><span class="p">:</span>
     293    <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">basetime</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
    308294        <span class="n">start</span> <span class="o">=</span> <span class="n">start</span> <span class="o">-</span> <span class="n">datetime</span><span class="o">.</span><span class="n">timedelta</span><span class="p">(</span><span class="n">days</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
    309295
    … …  
    330316    <span class="n">flexpart</span> <span class="o">=</span> <span class="n">EcFlexpart</span><span class="p">(</span><span class="n">c</span><span class="p">,</span> <span class="n">fluxes</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
    331317    <span class="n">flexpart</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="n">inputfiles</span><span class="p">,</span> <span class="n">c</span><span class="p">)</span>
     318    <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">stream</span><span class="o">.</span><span class="n">lower</span><span class="p">()</span> <span class="o">==</span> <span class="s1">&#39;elda&#39;</span><span class="p">:</span>
     319        <span class="n">flexpart</span><span class="o">.</span><span class="n">calc_extra_elda</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">prefix</span><span class="p">)</span>
    332320    <span class="n">flexpart</span><span class="o">.</span><span class="n">process_output</span><span class="p">(</span><span class="n">c</span><span class="p">)</span>
    333321
    … …  
    360348  <div role="contentinfo">
    361349    <p>
    362         &copy; Copyright 2018, Anne Philipp and Leopold Haimberger
     350        &copy; Copyright 2018, Anne Philipp and Leopold Haimberger.
    363351
    364352    </p>
    … …  
    379367 
    380368
    381    
    382    
    383       <script type="text/javascript" id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>
    384         <script type="text/javascript" src="../_static/jquery.js"></script>
    385         <script type="text/javascript" src="../_static/underscore.js"></script>
    386         <script type="text/javascript" src="../_static/doctools.js"></script>
    387    
     369    <script type="text/javascript">
     370        var DOCUMENTATION_OPTIONS = {
     371            URL_ROOT:'../',
     372            VERSION:'7.1 alpha',
     373            LANGUAGE:'None',
     374            COLLAPSE_INDEX:false,
     375            FILE_SUFFIX:'.html',
     376            HAS_SOURCE:  true,
     377            SOURCELINK_SUFFIX: '.txt'
     378        };
     379    </script>
     380      <script type="text/javascript" src="../_static/jquery.js"></script>
     381      <script type="text/javascript" src="../_static/underscore.js"></script>
     382      <script type="text/javascript" src="../_static/doctools.js"></script>
     383      <script type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
    388384
    389385 
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