Index: documentation/Sphinx/build/html/genindex.html
===================================================================
--- documentation/Sphinx/build/html/genindex.html	(revision 708c6674550abec09bd249f6654698bdeaed17d0)
+++ documentation/Sphinx/build/html/genindex.html	(revision 274f9efe4b8438ab5238967e39adc200c624b56e)
@@ -156,8 +156,56 @@
 
 <div class="genindex-jumpbox">
- <a href="#D"><strong>D</strong></a>
+ <a href="#A"><strong>A</strong></a>
+ | <a href="#C"><strong>C</strong></a>
+ | <a href="#D"><strong>D</strong></a>
+ | <a href="#E"><strong>E</strong></a>
+ | <a href="#G"><strong>G</strong></a>
  | <a href="#I"><strong>I</strong></a>
+ | <a href="#M"><strong>M</strong></a>
+ | <a href="#N"><strong>N</strong></a>
+ | <a href="#P"><strong>P</strong></a>
+ | <a href="#R"><strong>R</strong></a>
+ | <a href="#S"><strong>S</strong></a>
+ | <a href="#T"><strong>T</strong></a>
+ | <a href="#U"><strong>U</strong></a>
+ | <a href="#W"><strong>W</strong></a>
  
 </div>
+<h2 id="A">A</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#ControlFile.ControlFile.assign_args_to_control">assign_args_to_control() (ControlFile.ControlFile method)</a>
+</li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#ControlFile.ControlFile.assign_envs_to_control">assign_envs_to_control() (ControlFile.ControlFile method)</a>
+</li>
+  </ul></td>
+</tr></table>
+
+<h2 id="C">C</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#ControlFile.ControlFile.check_conditions">check_conditions() (ControlFile.ControlFile method)</a>
+</li>
+      <li><a href="api.html#ControlFile.ControlFile.check_install_conditions">check_install_conditions() (ControlFile.ControlFile method)</a>
+</li>
+      <li><a href="api.html#tools.clean_up">clean_up() (in module tools)</a>
+</li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#ControlFile.ControlFile">ControlFile (class in ControlFile)</a>
+
+      <ul>
+        <li><a href="api.html#module-ControlFile">(module)</a>
+</li>
+      </ul></li>
+      <li><a href="api.html#GribTools.GribTools.copy">copy() (GribTools.GribTools method)</a>
+</li>
+      <li><a href="api.html#EcFlexpart.EcFlexpart.create">create() (EcFlexpart.EcFlexpart method)</a>
+</li>
+  </ul></td>
+</tr></table>
+
 <h2 id="D">D</h2>
 <table style="width: 100%" class="indextable genindextable"><tr>
@@ -165,10 +213,60 @@
       <li><a href="api.html#disaggregation.dapoly">dapoly() (in module disaggregation)</a>
 </li>
-  </ul></td>
-  <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="api.html#disaggregation.darain">darain() (in module disaggregation)</a>
 </li>
+      <li><a href="api.html#MarsRetrieval.MarsRetrieval.data_retrieve">data_retrieve() (MarsRetrieval.MarsRetrieval method)</a>
+</li>
+      <li><a href="api.html#EcFlexpart.EcFlexpart.deacc_fluxes">deacc_fluxes() (EcFlexpart.EcFlexpart method)</a>
+</li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#install.delete_convert_build">delete_convert_build() (in module install)</a>
+</li>
+      <li><a href="api.html#UioFiles.UioFiles.delete_files">delete_files() (UioFiles.UioFiles method)</a>
+</li>
       <li><a href="api.html#module-disaggregation">disaggregation (module)</a>
 </li>
+      <li><a href="api.html#MarsRetrieval.MarsRetrieval.display_info">display_info() (MarsRetrieval.MarsRetrieval method)</a>
+</li>
+      <li><a href="api.html#get_mars_data.do_retrievement">do_retrievement() (in module get_mars_data)</a>
+</li>
+  </ul></td>
+</tr></table>
+
+<h2 id="E">E</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#EcFlexpart.EcFlexpart">EcFlexpart (class in EcFlexpart)</a>
+
+      <ul>
+        <li><a href="api.html#module-EcFlexpart">(module)</a>
+</li>
+      </ul></li>
+  </ul></td>
+</tr></table>
+
+<h2 id="G">G</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#tools.get_cmdline_arguments">get_cmdline_arguments() (in module tools)</a>
+</li>
+      <li><a href="api.html#install.get_install_cmdline_arguments">get_install_cmdline_arguments() (in module install)</a>
+</li>
+      <li><a href="api.html#GribTools.GribTools.get_keys">get_keys() (GribTools.GribTools method)</a>
+</li>
+      <li><a href="api.html#tools.get_list_as_string">get_list_as_string() (in module tools)</a>
+</li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#module-get_mars_data">get_mars_data (module)</a>
+</li>
+      <li><a href="api.html#get_mars_data.get_mars_data">get_mars_data() (in module get_mars_data)</a>
+</li>
+      <li><a href="api.html#GribTools.GribTools">GribTools (class in GribTools)</a>
+
+      <ul>
+        <li><a href="api.html#module-GribTools">(module)</a>
+</li>
+      </ul></li>
   </ul></td>
 </tr></table>
@@ -178,4 +276,158 @@
   <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="api.html#disaggregation.IA3">IA3() (in module disaggregation)</a>
+</li>
+      <li><a href="api.html#GribTools.GribTools.index">index() (GribTools.GribTools method)</a>
+</li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#tools.init128">init128() (in module tools)</a>
+</li>
+      <li><a href="api.html#module-install">install (module)</a>
+</li>
+      <li><a href="api.html#install.install_via_gateway">install_via_gateway() (in module install)</a>
+</li>
+  </ul></td>
+</tr></table>
+
+<h2 id="M">M</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#get_mars_data.main">main() (in module get_mars_data)</a>
+
+      <ul>
+        <li><a href="api.html#install.main">(in module install)</a>
+</li>
+        <li><a href="api.html#prepare_flexpart.main">(in module prepare_flexpart)</a>
+</li>
+        <li><a href="api.html#submit.main">(in module submit)</a>
+</li>
+      </ul></li>
+      <li><a href="api.html#install.make_convert_build">make_convert_build() (in module install)</a>
+</li>
+      <li><a href="api.html#tools.make_dir">make_dir() (in module tools)</a>
+</li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#MarsRetrieval.MarsRetrieval">MarsRetrieval (class in MarsRetrieval)</a>
+
+      <ul>
+        <li><a href="api.html#module-MarsRetrieval">(module)</a>
+</li>
+      </ul></li>
+      <li><a href="api.html#install.mk_compilejob">mk_compilejob() (in module install)</a>
+</li>
+      <li><a href="api.html#install.mk_env_vars">mk_env_vars() (in module install)</a>
+</li>
+      <li><a href="api.html#install.mk_job_template">mk_job_template() (in module install)</a>
+</li>
+      <li><a href="api.html#install.mk_tarball">mk_tarball() (in module install)</a>
+</li>
+      <li><a href="api.html#tools.my_error">my_error() (in module tools)</a>
+</li>
+  </ul></td>
+</tr></table>
+
+<h2 id="N">N</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#tools.none_or_int">none_or_int() (in module tools)</a>
+</li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#tools.none_or_str">none_or_str() (in module tools)</a>
+</li>
+      <li><a href="api.html#tools.normal_exit">normal_exit() (in module tools)</a>
+</li>
+  </ul></td>
+</tr></table>
+
+<h2 id="P">P</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#module-prepare_flexpart">prepare_flexpart (module)</a>
+</li>
+      <li><a href="api.html#prepare_flexpart.prepare_flexpart">prepare_flexpart() (in module prepare_flexpart)</a>
+</li>
+      <li><a href="api.html#EcFlexpart.EcFlexpart.prepare_fp_files">prepare_fp_files() (EcFlexpart.EcFlexpart method)</a>
+</li>
+      <li><a href="api.html#MarsRetrieval.MarsRetrieval.print_info">print_info() (MarsRetrieval.MarsRetrieval method)</a>
+</li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#MarsRetrieval.MarsRetrieval.print_infodata_csv">print_infodata_csv() (MarsRetrieval.MarsRetrieval method)</a>
+</li>
+      <li><a href="api.html#EcFlexpart.EcFlexpart.process_output">process_output() (EcFlexpart.EcFlexpart method)</a>
+</li>
+      <li><a href="api.html#tools.product">product() (in module tools)</a>
+</li>
+      <li><a href="api.html#tools.put_file_to_ecserver">put_file_to_ecserver() (in module tools)</a>
+</li>
+  </ul></td>
+</tr></table>
+
+<h2 id="R">R</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#tools.read_ecenv">read_ecenv() (in module tools)</a>
+</li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#EcFlexpart.EcFlexpart.retrieve">retrieve() (EcFlexpart.EcFlexpart method)</a>
+</li>
+  </ul></td>
+</tr></table>
+
+<h2 id="S">S</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#GribTools.GribTools.set_keys">set_keys() (GribTools.GribTools method)</a>
+</li>
+      <li><a href="api.html#tools.silent_remove">silent_remove() (in module tools)</a>
+</li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#module-submit">submit (module)</a>
+</li>
+      <li><a href="api.html#submit.submit">submit() (in module submit)</a>
+</li>
+      <li><a href="api.html#tools.submit_job_to_ecserver">submit_job_to_ecserver() (in module tools)</a>
+</li>
+  </ul></td>
+</tr></table>
+
+<h2 id="T">T</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#ControlFile.ControlFile.to_list">to_list() (ControlFile.ControlFile method)</a>
+</li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#tools.to_param_id">to_param_id() (in module tools)</a>
+</li>
+      <li><a href="api.html#module-tools">tools (module)</a>
+</li>
+  </ul></td>
+</tr></table>
+
+<h2 id="U">U</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#UioFiles.UioFiles">UioFiles (class in UioFiles)</a>
+
+      <ul>
+        <li><a href="api.html#module-UioFiles">(module)</a>
+</li>
+      </ul></li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#install.un_tarball">un_tarball() (in module install)</a>
+</li>
+  </ul></td>
+</tr></table>
+
+<h2 id="W">W</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="api.html#EcFlexpart.EcFlexpart.write_namelist">write_namelist() (EcFlexpart.EcFlexpart method)</a>
 </li>
   </ul></td>
