Changeset ca867de in flex_extract.git for run/run.sh

Timestamp:

Oct 5, 2018, 3:35:18 PM (6 years ago)

Author:

Anne Philipp <anne.philipp@…>

Branches:

master, ctbto, dev

Children:

5bad6ec

Parents:

27fe969

Message:

refactored functions in EcFlexpart? and did some minor changes

File:

• run/run.sh (modified) (1 diff, 1 prop)

run/run.sh

@@ -1 +1 @@
 #!/bin/bash
- 
-pyscript = ../python/submit.py
+#
+# @Author: Anne Philipp
+#
+# @Date: October, 4 2018
+#
+# @Description: 
+#
 
+
+# -----------------------------------------------------------------
+# AVAILABLE COMMANDLINE ARGUMENTS TO SET
+#
+# THE USER HAS TO SPECIFY THESE PARAMETER
+#
+
+QUEUE=None
+START_DATE='20120908'
+END_DATE=None
+DATE_CHUNK=None
+BASETIME=None
+STEP=None
+LEVELIST=None
+AREA=None
+INPUTDIR='../../run/workspace/test'
+OUTPUTDIR=None
+FLEXPART_ROOT_SCRIPTS=None 
+PP_ID=None
+JOB_TEMPLATE='job.temp' 
+CONTROLFILE='CONTROL.temp' 
+DEBUG=1 
+REQUEST=1
+
+# -----------------------------------------------------------------
+#
+# AFTER THIS LINE THE USER DOES NOT HAVE TO CHANGE ANYTHING !!!
+#
+# -----------------------------------------------------------------
+
+# PATH TO SUBMISSION SCRIPT
+pyscript=../source/python/submit.py
+
+# INITIALIZE EMPTY PARAMETERLIST
+parameterlist=""
+
+# CHECK FOR MORE PARAMETER 
+if [ -n "$START_DATE" ]; then
+  parameterlist+=" --start_date=$START_DATE"
+fi
+if [ -n "$END_DATE" ]; then
+  parameterlist+=" --end_date=$END_DATE"
+fi
+if [ -n "$DATE_CHUNK" ]; then
+  parameterlist+=" --date_chunk=$DATE_CHUNK"
+fi
+if [ -n "$BASETIME" ]; then
+  parameterlist+=" --basetime=$BASETIME"
+fi
+if [ -n "$STEP" ]; then
+  parameterlist+=" --step=$STEP"
+fi
+if [ -n "$LEVELIST" ]; then
+  parameterlist+=" --levelist=$LEVELIST"
+fi
+if [ -n "$AREA" ]; then
+  parameterlist+=" --area=$AREA"
+fi
+if [ -n "$INPUTDIR" ]; then
+  parameterlist+=" --inputdir=$INPUTDIR"
+fi
+if [ -n "$OUTPUTDIR" ]; then
+  parameterlist+=" --outputdir=$OUTPUTDIR"
+fi
+if [ -n "$FLEXPART_ROOT_SCRIPTS" ]; then
+  parameterlist+=" --flexpart_root_scripts=$FLEXPART_ROOT_SCRIPTS"
+fi
+if [ -n "$PP_ID" ]; then
+  parameterlist+=" --ppid=$PP_ID"
+fi
+if [ -n "$JOB_TEMPLATE" ]; then
+  parameterlist+=" --job_template=$JOB_TEMPLATE"
+fi
+if [ -n "$QUEUE" ]; then
+  parameterlist+=" --queue=$QUEUE"
+fi
+if [ -n "$CONTROLFILE" ]; then
+  parameterlist+=" --controlfile=$CONTROLFILE"
+fi
+if [ -n "$DEBUG" ]; then
+  parameterlist+=" --debug=$DEBUG"
+fi
+if [ -n "$REQUEST" ]; then
+  parameterlist+=" --request=$REQUEST"
+fi
+
+# -----------------------------------------------------------------
+# CALL INSTALLATION SCRIPT WITH DETERMINED COMMANDLINE ARGUMENTS
+
+$pyscript $parameterlist
+