Changeset c31ee05 in flex_extract.git

Timestamp:

Oct 20, 2022, 8:37:03 PM (18 months ago)

Author:

Anne Tipka <anne.tipka@…>

Branches:

dev

Children:

78d1f9d

Parents:

5cff464

Message:

added loading of ecaccess module in submit script and adjusted installscript to Bologna environment

Files:

• Templates/installscript.template.bologna (modified) (3 diffs)
• setup_bologna.sh (modified) (1 diff)
• setup_local_bologna.sh (modified) (1 diff)

Templates/installscript.template.bologna

@@ -1 @@
-#!/bin/ksh
+#!/bin/bash
 
 # ON ECS or HPC servers:
@@ -5 +5 @@
 # start with srun <NAME_OF_THIS_FILE> directly on machine
 
-#SBATCH --chdir=$$SCRATCH
+#SBATCH --chdir=/scratch/$username
 #SBATCH --qos=el
-#SBATCH --job-name=flex_extract
-#SBATCH --output=flex_extract.%j.out
-#SBATCH --error=flex_error.%j.out
+#SBATCH --job-name=flex_compile
+#SBATCH --output=flex_compile.%j.out
+#SBATCH --error=flex_compile.%j.out
 #SBATCH --mail-type=FAIL
-#SBATCH --mail-user=$username
 
 ## CRAY specific batch requests
@@ -59 +58 @@
 ls -l $fortran_program >>flexcompile
 if [ $$? -eq 0 ]; then
-  echo 'SUCCESS!' >>flexcompile
+  echo -e '\nSUCCESS!' >>flexcompile
   mail -s flexcompile.$${HOST}.$$$$ $${USER} <flexcompile
+  sleep 1
 else
   echo Environment: >>flexcompile
   env >> flexcompile
   mail -s "ERROR! flexcompile.$${HOST}.$$$$" $${USER} <flexcompile
+  sleep 1
 fi

setup_bologna.sh

@@ -53 +53 @@
 # CHECK IF ON ECMWF SERVER; 
 if [[ $EC_CLUSTER == "ecs" ]] || [[ $EC_CLUSTER == "aa"* ]] || [[ $EC_CLUSTER == "ab"* ]] || [[ $EC_CLUSTER == "ac"* ]] || [[ $EC_CLUSTER == "ad"* ]]; then
-# LOAD PYTHON3 MODULE
-  module load python3
+# LOAD PYTHON3 AND ECACCESS MODULES
+  module load python3 ecaccess
 fi 
 

setup_local_bologna.sh

@@ -57 +57 @@
 # CHECK IF ON ECMWF SERVER; 0
 if [[ $EC_CLUSTER == "ecs" ]] || [[ $EC_CLUSTER == "aa"* ]] || [[ $EC_CLUSTER == "ac"* ]] || [[ $EC_CLUSTER == "ad"* ]] || [[ $EC_CLUSTER == "ab"* ]]; then
-# LOAD PYTHON3 MODULE
-  module load python3
+# LOAD PYTHON3 AND ECACCESS MODULES
+  module load python3 ecaccess
 fi