1 | #!/bin/bash |
---|
2 | # |
---|
3 | # @Author: Anne Philipp |
---|
4 | # |
---|
5 | # @Date: October, 4 2018 |
---|
6 | # |
---|
7 | # @Description: Sets all command line parameter for the "submit.py" script |
---|
8 | # from flex_extract and calls it. |
---|
9 | # |
---|
10 | # @ChangeHistory: November, 23 2018 |
---|
11 | # In this version the parameters are fixed for the extraction of |
---|
12 | # MARS request files from the current flex_extract version to run |
---|
13 | # a couple of comparison checks. |
---|
14 | # The script has to be called with the name of the control file and |
---|
15 | # the path to the control files. |
---|
16 | # |
---|
17 | # Example: |
---|
18 | # ./run_local.sh 7.1 Controls |
---|
19 | # |
---|
20 | |
---|
21 | |
---|
22 | # ----------------------------------------------------------------- |
---|
23 | # AVAILABLE COMMANDLINE ARGUMENTS TO SET |
---|
24 | # |
---|
25 | # THE USER HAS TO SPECIFY THESE PARAMETER |
---|
26 | # |
---|
27 | |
---|
28 | QUEUE='' |
---|
29 | START_DATE=None |
---|
30 | END_DATE=None |
---|
31 | DATE_CHUNK=None |
---|
32 | BASETIME=None |
---|
33 | STEP=None |
---|
34 | LEVELIST=None |
---|
35 | AREA=None |
---|
36 | INPUTDIR='./'${1}'/' |
---|
37 | OUTPUTDIR=None |
---|
38 | FLEXPART_ROOT_SCRIPTS=None |
---|
39 | PP_ID=None |
---|
40 | JOB_TEMPLATE='' |
---|
41 | CONTROLFILE=$2 |
---|
42 | DEBUG=0 |
---|
43 | REQUEST=1 |
---|
44 | PUBLIC=0 |
---|
45 | |
---|
46 | # ----------------------------------------------------------------- |
---|
47 | # |
---|
48 | # AFTER THIS LINE THE USER DOES NOT HAVE TO CHANGE ANYTHING !!! |
---|
49 | # |
---|
50 | # ----------------------------------------------------------------- |
---|
51 | |
---|
52 | # PATH TO SUBMISSION SCRIPT |
---|
53 | pyscript=../../../source/python/submit.py |
---|
54 | |
---|
55 | # INITIALIZE EMPTY PARAMETERLIST |
---|
56 | parameterlist="" |
---|
57 | |
---|
58 | # CHECK FOR MORE PARAMETER |
---|
59 | if [ -n "$START_DATE" ]; then |
---|
60 | parameterlist+=" --start_date=$START_DATE" |
---|
61 | fi |
---|
62 | if [ -n "$END_DATE" ]; then |
---|
63 | parameterlist+=" --end_date=$END_DATE" |
---|
64 | fi |
---|
65 | if [ -n "$DATE_CHUNK" ]; then |
---|
66 | parameterlist+=" --date_chunk=$DATE_CHUNK" |
---|
67 | fi |
---|
68 | if [ -n "$BASETIME" ]; then |
---|
69 | parameterlist+=" --basetime=$BASETIME" |
---|
70 | fi |
---|
71 | if [ -n "$STEP" ]; then |
---|
72 | parameterlist+=" --step=$STEP" |
---|
73 | fi |
---|
74 | if [ -n "$LEVELIST" ]; then |
---|
75 | parameterlist+=" --levelist=$LEVELIST" |
---|
76 | fi |
---|
77 | if [ -n "$AREA" ]; then |
---|
78 | parameterlist+=" --area=$AREA" |
---|
79 | fi |
---|
80 | if [ -n "$INPUTDIR" ]; then |
---|
81 | parameterlist+=" --inputdir=$INPUTDIR" |
---|
82 | fi |
---|
83 | if [ -n "$OUTPUTDIR" ]; then |
---|
84 | parameterlist+=" --outputdir=$OUTPUTDIR" |
---|
85 | fi |
---|
86 | if [ -n "$FLEXPART_ROOT_SCRIPTS" ]; then |
---|
87 | parameterlist+=" --flexpart_root_scripts=$FLEXPART_ROOT_SCRIPTS" |
---|
88 | fi |
---|
89 | if [ -n "$PP_ID" ]; then |
---|
90 | parameterlist+=" --ppid=$PP_ID" |
---|
91 | fi |
---|
92 | if [ -n "$JOB_TEMPLATE" ]; then |
---|
93 | parameterlist+=" --job_template=$JOB_TEMPLATE" |
---|
94 | fi |
---|
95 | if [ -n "$QUEUE" ]; then |
---|
96 | parameterlist+=" --queue=$QUEUE" |
---|
97 | fi |
---|
98 | if [ -n "$CONTROLFILE" ]; then |
---|
99 | parameterlist+=" --controlfile=$CONTROLFILE" |
---|
100 | fi |
---|
101 | if [ -n "$DEBUG" ]; then |
---|
102 | parameterlist+=" --debug=$DEBUG" |
---|
103 | fi |
---|
104 | if [ -n "$REQUEST" ]; then |
---|
105 | parameterlist+=" --request=$REQUEST" |
---|
106 | fi |
---|
107 | if [ -n "$PUBLIC" ]; then |
---|
108 | parameterlist+=" --public=$PUBLIC" |
---|
109 | fi |
---|
110 | |
---|
111 | # ----------------------------------------------------------------- |
---|
112 | # CALL SCRIPT WITH DETERMINED COMMANDLINE ARGUMENTS |
---|
113 | |
---|
114 | $pyscript $parameterlist |
---|
115 | |
---|