ctbtodev
Last change
on this file since c5074d2 was
c5074d2,
checked in by Anne Philipp <anne.philipp@…>, 6 years ago
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added making of namelist file and jobscript via genshi templates
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-
Property mode set to
100644
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File size:
1.6 KB
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Rev | Line | |
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[d69b677] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | # ON ECGB: |
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| 4 | # start with ecaccess-job-submit -queueName ecgb NAME_OF_THIS_FILE on gateway server |
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| 5 | # start with sbatch NAME_OF_THIS_FILE directly on machine |
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| 6 | |
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[c5074d2] | 7 | #SBATCH --workdir=/scratch/ms/$usergroup/$username |
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[d69b677] | 8 | #SBATCH --qos=normal |
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| 9 | #SBATCH --job-name=flex_ecmwf |
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| 10 | #SBATCH --output=flex_ecmwf.%j.out |
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| 11 | #SBATCH --error=flex_ecmwf.%j.out |
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| 12 | #SBATCH --mail-type=FAIL |
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| 13 | #SBATCH --time=12:00:00 |
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| 14 | |
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| 15 | ## CRAY specific batch requests |
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| 16 | ##PBS -N flex_ecmwf |
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| 17 | ##PBS -q np |
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| 18 | ##PBS -S /usr/bin/ksh |
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[c5074d2] | 19 | ## -o /scratch/ms/$usergroup/$username/flex_ecmwf.$${PBS_JOBID}.out |
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[d69b677] | 20 | ## job output is in .ecaccess_DO_NOT_REMOVE |
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| 21 | ##PBS -j oe |
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| 22 | ##PBS -V |
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| 23 | ##PBS -l EC_threads_per_task=24 |
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| 24 | ##PBS -l EC_memory_per_task=32000MB |
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| 25 | |
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| 26 | set -x |
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[c5074d2] | 27 | export VERSION=$version_number |
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| 28 | case $${HOST} in |
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[d69b677] | 29 | *ecg*) |
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| 30 | module load python |
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| 31 | module unload grib_api |
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| 32 | module unload emos |
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| 33 | module load grib_api/1.14.5 |
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| 34 | module load emos/437-r64 |
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[c5074d2] | 35 | export PATH=$${PATH}:$fp_root_path |
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[d69b677] | 36 | ;; |
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| 37 | *cca*) |
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| 38 | module switch PrgEnv-cray PrgEnv-intel |
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| 39 | module load grib_api |
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| 40 | module load emos |
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| 41 | module load python |
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[c5074d2] | 42 | export SCRATCH=$${TMPDIR} |
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| 43 | export PATH=$${PATH}:$fp_root_path |
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[d69b677] | 44 | ;; |
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| 45 | esac |
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| 46 | |
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[c5074d2] | 47 | cd $${SCRATCH} |
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| 48 | mkdir -p python$$$$ |
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| 49 | cd python$$$$ |
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[d69b677] | 50 | |
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[25b14be] | 51 | export CONTROL=CONTROL |
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[d69b677] | 52 | |
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[c5074d2] | 53 | cat >$${CONTROL}<<EOF |
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[d69b677] | 54 | EOF |
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| 55 | |
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| 56 | |
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[c5074d2] | 57 | submit.py --controlfile=$${CONTROL} --inputdir=./work --outputdir=./work 1> prot 2>&1 |
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[d69b677] | 58 | |
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| 59 | if [ $? -eq 0 ] ; then |
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| 60 | l=0 |
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[c5074d2] | 61 | for muser in `grep -i MAILOPS $${CONTROL}`; do |
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| 62 | if [ $${l} -gt 0 ] ; then |
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| 63 | mail -s flex.$${HOST}.$$$$ $${muser} <prot |
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[d69b677] | 64 | fi |
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[c5074d2] | 65 | l=$(($${l}+1)) |
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[d69b677] | 66 | done |
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| 67 | else |
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| 68 | l=0 |
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[c5074d2] | 69 | for muser in `grep -i MAILFAIL $${CONTROL}`; do |
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| 70 | if [ $${l} -gt 0 ] ; then |
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| 71 | mail -s "ERROR! flex.$${HOST}.$$$$" $${muser} <prot |
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[d69b677] | 72 | fi |
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[c5074d2] | 73 | l=$(($${l}+1)) |
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[d69b677] | 74 | done |
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| 75 | fi |
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| 76 | |
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