#!/usr/bin/env python # -*- coding: utf-8 -*- #******************************************************************************* # @Author: Anne Fouilloux (University of Oslo) # # @Date: October 2014 # # @Change History: # # November 2015 - Leopold Haimberger (University of Vienna): # - using the WebAPI also for general MARS retrievals # - job submission on ecgate and cca # - job templates suitable for twice daily operational dissemination # - dividing retrievals of longer periods into digestable chunks # - retrieve also longer term forecasts, not only analyses and # short term forecast data # - conversion into GRIB2 # - conversion into .fp format for faster execution of FLEXPART # # February 2018 - Anne Philipp (University of Vienna): # - applied PEP8 style guide # - added documentation # - minor changes in programming style for consistence # - BUG: removed call of clean_up-Function after call of # prepareFlexpart in main since it is already called in # prepareFlexpart at the end! # - created function main and moved the two function calls for # arguments and prepare_flexpart into it # # @License: # (C) Copyright 2014-2018. # # This software is licensed under the terms of the Apache Licence Version 2.0 # which can be obtained at http://www.apache.org/licenses/LICENSE-2.0. # # @Program Functionality: # This program prepares the final version of the grib files which are # then used by FLEXPART. It converts the bunch of grib files extracted # via get_mars_data by doing for example the necessary conversion to get # consistent grids or the disaggregation of flux data. Finally, the # program combines the data fields in files per available hour with the # naming convention xxYYMMDDHH, where xx should be 2 arbitrary letters # (mostly xx is chosen to be "EN"). # # @Program Content: # - main # - prepare_flexpart # #******************************************************************************* # ------------------------------------------------------------------------------ # MODULES # ------------------------------------------------------------------------------ import datetime import os import inspect import sys import socket # software specific classes and modules from flex_extract import _config from UioFiles import UioFiles from tools import clean_up, get_cmdline_arguments, read_ecenv from EcFlexpart import EcFlexpart ecapi = 'ecmwf' not in socket.gethostname() try: if ecapi: import ecmwfapi except ImportError: ecapi = False # ------------------------------------------------------------------------------ # FUNCTION # ------------------------------------------------------------------------------ def main(): ''' @Description: If prepare_flexpart is called from command line, this function controls the program flow and calls the argumentparser function and the prepare_flexpart function for preparation of GRIB data for FLEXPART. @Input: @Return: ''' args = get_cmdline_arguments() try: c = ControlFile(args.controlfile) except IOError: print('Could not read CONTROL file "' + args.controlfile + '"') print('Either it does not exist or its syntax is wrong.') print('Try "' + sys.argv[0].split('/')[-1] + \ ' -h" to print usage information') sys.exit(1) env_parameter = read_ecenv(_config.PATH_ECMWF_ENV) c.assign_args_to_control(args, env_parameter) c.assign_envs_to_control(env_parameter) c.check_conditions(args.queue) prepare_flexpart(args.ppid, c) return def prepare_flexpart(ppid, c): ''' @Description: Lists all grib files retrieved from MARS with get_mars_data and uses prepares data for the use in FLEXPART. Specific data fields are converted to a different grid and the flux data are going to be disaggregated. The data fields are collected by hour and stored in a file with a specific FLEXPART relevant naming convention. @Input: ppid: int Contains the ppid number of the current ECMWF job. If it is called from this script, it is "None". c: instance of class ControlFile Contains all the parameters of CONTROL file, which are e.g.: DAY1(start_date), DAY2(end_date), DTIME, MAXSTEP, TYPE, TIME, STEP, CLASS(marsclass), STREAM, NUMBER, EXPVER, GRID, LEFT, LOWER, UPPER, RIGHT, LEVEL, LEVELIST, RESOL, GAUSS, ACCURACY, OMEGA, OMEGADIFF, ETA, ETADIFF, DPDETA, SMOOTH, FORMAT, ADDPAR, WRF, CWC, PREFIX, ECSTORAGE, ECTRANS, ECFSDIR, MAILOPS, MAILFAIL, GRIB2FLEXPART, FLEXPARTDIR, BASETIME DATE_CHUNK, DEBUG, INPUTDIR, OUTPUTDIR, FLEXPART_ROOT_SCRIPTS For more information about format and content of the parameter see documentation. @Return: ''' if not ppid: c.ppid = str(os.getppid()) else: c.ppid = ppid c.ecapi = ecapi # create the start and end date start = datetime.date(year=int(c.start_date[:4]), month=int(c.start_date[4:6]), day=int(c.start_date[6:])) end = datetime.date(year=int(c.end_date[:4]), month=int(c.end_date[4:6]), day=int(c.end_date[6:])) # assign starting date minus 1 day # since for basetime 00 we need the 12 hours upfront # (the day before from 12 UTC to current day 00 UTC) if c.basetime == '00': start = start - datetime.timedelta(days=1) print('Prepare ' + start.strftime("%Y%m%d") + "/to/" + end.strftime("%Y%m%d")) # create output dir if necessary if not os.path.exists(c.outputdir): os.makedirs(c.outputdir) # get all files with flux data to be deaccumulated inputfiles = UioFiles(c.inputdir, '*OG_acc_SL*.' + c.ppid + '.*') # deaccumulate the flux data flexpart = EcFlexpart(c, fluxes=True) flexpart.write_namelist(c, _config.FILE_NAMELIST) flexpart.deacc_fluxes(inputfiles, c) # get a list of all files from the root inputdir inputfiles = UioFiles(c.inputdir, '????__??.*' + c.ppid + '.*') # produce FLEXPART-ready GRIB files and process them - # copy/transfer/interpolate them or make them GRIB2 flexpart = EcFlexpart(c, fluxes=False) flexpart.create(inputfiles, c) flexpart.process_output(c) # check if in debugging mode, then store all files # otherwise delete temporary files if int(c.debug) != 0: print('\nTemporary files left intact') else: clean_up(c) return if __name__ == "__main__": main()