#!/usr/bin/env python # -*- coding: utf-8 -*- #************************************************************************ # TODO AP # - wieso cleanup in main wenn es in prepareflexpart bereits abgefragt wurde? # doppelt gemoppelt? # - wieso start=startm1 wenn basetime = 0 ? wenn die fluxes nicht mehr # relevant sind? verstehe ich nicht #************************************************************************ #******************************************************************************* # @Author: Anne Fouilloux (University of Oslo) # # @Date: October 2014 # # @Change History: # # November 2015 - Leopold Haimberger (University of Vienna): # - using the WebAPI also for general MARS retrievals # - job submission on ecgate and cca # - job templates suitable for twice daily operational dissemination # - dividing retrievals of longer periods into digestable chunks # - retrieve also longer term forecasts, not only analyses and # short term forecast data # - conversion into GRIB2 # - conversion into .fp format for faster execution of FLEXPART # # February 2018 - Anne Philipp (University of Vienna): # - applied PEP8 style guide # - added documentation # - minor changes in programming style for consistence # - BUG: removed call of cleanup-Function after call of # prepareFlexpart in main since it is already called in # prepareFlexpart at the end! # - created function main and moved the two function calls for # arguments and prepareFLEXPART into it # # @License: # (C) Copyright 2014-2018. # # This software is licensed under the terms of the Apache Licence Version 2.0 # which can be obtained at http://www.apache.org/licenses/LICENSE-2.0. # # @Program Functionality: # This program prepares the final version of the grib files which are # then used by FLEXPART. It converts the bunch of grib files extracted # via getMARSdata by doing for example the necessary conversion to get # consistent grids or the disaggregation of flux data. Finally, the # program combines the data fields in files per available hour with the # naming convention xxYYMMDDHH, where xx should be 2 arbitrary letters # (mostly xx is chosen to be "EN"). # # @Program Content: # - main # - prepareFLEXPART # #******************************************************************************* # ------------------------------------------------------------------------------ # MODULES # ------------------------------------------------------------------------------ import shutil import datetime #import time import os import inspect import sys import socket from argparse import ArgumentParser, ArgumentDefaultsHelpFormatter hostname = socket.gethostname() ecapi = 'ecmwf' not in hostname try: if ecapi: import ecmwfapi except ImportError: ecapi = False # add path to pythonpath so that python finds its buddies localpythonpath = os.path.dirname(os.path.abspath( inspect.getfile(inspect.currentframe()))) if localpythonpath not in sys.path: sys.path.append(localpythonpath) # software specific classes and modules from flex_extract from UIOFiles import UIOFiles from Tools import interpret_args_and_control, cleanup from ECFlexpart import ECFlexpart # ------------------------------------------------------------------------------ # FUNCTION # ------------------------------------------------------------------------------ def main(): ''' @Description: If prepareFLEXPART is called from command line, this function controls the program flow and calls the argumentparser function and the prepareFLEXPART function for preparation of GRIB data for FLEXPART. @Input: @Return: ''' args, c = interpret_args_and_control() prepareFLEXPART(args, c) return def prepareFLEXPART(args, c): ''' @Description: Lists all grib files retrieved from MARS with getMARSdata and uses prepares data for the use in FLEXPART. Specific data fields are converted to a different grid and the flux data are going to be disaggregated. The data fields are collected by hour and stored in a file with a specific FLEXPART relevant naming convention. @Input: args: instance of ArgumentParser Contains the commandline arguments from script/program call. c: instance of class ControlFile Contains all the parameters of CONTROL file, which are e.g.: DAY1(start_date), DAY2(end_date), DTIME, MAXSTEP, TYPE, TIME, STEP, CLASS(marsclass), STREAM, NUMBER, EXPVER, GRID, LEFT, LOWER, UPPER, RIGHT, LEVEL, LEVELIST, RESOL, GAUSS, ACCURACY, OMEGA, OMEGADIFF, ETA, ETADIFF, DPDETA, SMOOTH, FORMAT, ADDPAR, WRF, CWC, PREFIX, ECSTORAGE, ECTRANS, ECFSDIR, MAILOPS, MAILFAIL, GRIB2FLEXPART, FLEXPARTDIR, BASETIME DATE_CHUNK, DEBUG, INPUTDIR, OUTPUTDIR, FLEXPART_ROOT_SCRIPTS For more information about format and content of the parameter see documentation. @Return: ''' if not args.ppid: c.ppid = str(os.getppid()) else: c.ppid = args.ppid c.ecapi = ecapi # create the start and end date start = datetime.date(year=int(c.start_date[:4]), month=int(c.start_date[4:6]), day=int(c.start_date[6:])) end = datetime.date(year=int(c.end_date[:4]), month=int(c.end_date[4:6]), day=int(c.end_date[6:])) # to deaccumulate the fluxes correctly # one day ahead of the start date and # one day after the end date is needed startm1 = start - datetime.timedelta(days=1) endp1 = end + datetime.timedelta(days=1) # get all files with flux data to be deaccumulated inputfiles = UIOFiles('*OG_acc_SL*.' + c.ppid + '.*') inputfiles.listFiles(c.inputdir) # create output dir if necessary if not os.path.exists(c.outputdir): os.makedirs(c.outputdir) # deaccumulate the flux data flexpart = ECFlexpart(c, fluxes=True) flexpart.write_namelist(c, 'fort.4') flexpart.deacc_fluxes(inputfiles, c) print('Prepare ' + start.strftime("%Y%m%d") + "/to/" + end.strftime("%Y%m%d")) # get a list of all files from the root inputdir inputfiles = UIOFiles('????__??.*' + c.ppid + '.*') inputfiles.listFiles(c.inputdir) # produce FLEXPART-ready GRIB files and # process GRIB files - # copy/transfer/interpolate them or make them GRIB2 if c.basetime == '00': start = startm1 flexpart = ECFlexpart(c, fluxes=False) flexpart.create(inputfiles, c) flexpart.process_output(c) # check if in debugging mode, then store all files # otherwise delete temporary files if int(c.debug) != 0: print('Temporary files left intact') else: cleanup(c) return if __name__ == "__main__": main()