source: flex_extract.git/python/compilejob.ksh @ 54a8a01

dev
Last change on this file since 54a8a01 was 54a8a01, checked in by Anne Philipp <anne.philipp@…>, 17 months ago

restructuring, documentations and bug fixes

  • Property mode set to 100644
File size: 1.8 KB
Line 
1#!/bin/ksh
2
3# ON ECGB:
4# start with ecaccess-job-submit -queueName ecgb NAME_OF_THIS_FILE  on gateway server
5# start with sbatch NAME_OF_THIS_FILE directly on machine
6
7#SBATCH --workdir=/scratch/ms/at/km4a
8#SBATCH --qos=normal
9#SBATCH --job-name=flex_ecmwf
10#SBATCH --output=flex_ecmwf.%j.out
11#SBATCH --error=flex_ecmwf.%j.out
12#SBATCH --mail-type=FAIL
13#SBATCH --time=12:00:00
14
15## CRAY specific batch requests
16##PBS -N flex_ecmwf
17##PBS -q ns
18##PBS -S /usr/bin/ksh
19# -o /scratch/ms/no/sbc/flex_ecmwf.$Jobname.$Job_ID.out
20# job output is in .ecaccess_DO_NOT_REMOVE
21##PBS -j oe
22##PBS -V
23##PBS -l EC_threads_per_task=1
24##PBS -l EC_memory_per_task=3200MB
25
26set -x
27export VERSION=7.1
28case $HOST in
29  *ecg*)
30  module load python
31  module unload grib_api
32  module unload emos
33  module load grib_api/1.14.5
34  module load emos/437-r64
35export FLEXPART_ROOT_SCRIPTS=${HOME}
36export MAKEFILE=Makefile.gfortran
37  ;;
38  *cca*)
39  module switch PrgEnv-cray PrgEnv-intel
40  module load grib_api
41  module load emos
42  module load python
43  echo ${GROUP}
44  echo ${HOME}
45  echo $HOME | awk -F / '{print $1, $2, $3, $4}'
46  export GROUP=`echo $HOME | awk -F / '{print $4}'`
47  export SCRATCH=/scratch/ms/${GROUP}/${USER}
48export FLEXPART_ROOT_SCRIPTS=${HOME}
49export MAKEFILE=Makefile.gfortran
50  ;;
51esac
52
53mkdir -p $FLEXPART_ROOT_SCRIPTS/flex_extract_v$VERSION
54cd $FLEXPART_ROOT_SCRIPTS/flex_extract_v$VERSION   # if FLEXPART_ROOT is not set this means cd to the home directory
55tar -xvf $HOME/flex_extract_v$VERSION.tar
56cd src
57\rm *.o *.mod CONVERT2
58make -f $MAKEFILE >flexcompile 2>flexcompile
59
60ls -l CONVERT2 >>flexcompile
61if [ $? -eq 0 ]; then
62  echo 'SUCCESS!' >>flexcompile
63  mail -s flexcompile.$HOST.$$ $USER <flexcompile
64else
65  echo Environment: >>flexcompile
66  env >> flexcompile
67  mail -s "ERROR! flexcompile.$HOST.$$" $USER <flexcompile
68fi
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